miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37403_dwi-mir-2a-1:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 56 cagcatatcacagccacctttgatgagct 84
|||||||||||||||| ||||||||||||
Sbjct: 45 cagcatatcacagccagctttgatgagct 73
>36752_dmo-mir-2a-1:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 57 agcatatcacagccacctttgatgagct 84
||||||||||||||| ||||||||||||
Sbjct: 47 agcatatcacagccagctttgatgagct 74
>35168_aae-mir-2b:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 59 catatcacagccacctttgatgagctg 85
||||||||||||| |||||||||||||
Sbjct: 50 catatcacagccagctttgatgagctg 76
>36076_dan-mir-2a-1:mirbase
Length = 75
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 45 gcatatcacagccagctttgatgagct 71
>36077_dan-mir-2a-2:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 41 gcatatcacagccagctttgatgagct 67
>36153_der-mir-2a-1:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 46 gcatatcacagccagctttgatgagct 72
>36154_der-mir-2a-2:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 41 gcatatcacagccagctttgatgagct 67
>36236_dgr-mir-2a-1:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 49 gcatatcacagccagctttgatgagct 75
>36237_dgr-mir-2a-2:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 41 gcatatcacagccagctttgatgagct 67
>36321_dme-mir-2a-1:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 46 gcatatcacagccagctttgatgagct 72
>36322_dme-mir-2a-1:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 46 gcatatcacagccagctttgatgagct 72
>36323_dme-mir-2a-2:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 41 gcatatcacagccagctttgatgagct 67
>36324_dme-mir-2a-2:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 41 gcatatcacagccagctttgatgagct 67
>36753_dmo-mir-2a-2:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 41 gcatatcacagccagctttgatgagct 67
>36825_dpe-mir-2a-1:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 44 gcatatcacagccagctttgatgagct 70
>36826_dpe-mir-2a-2:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 41 gcatatcacagccagctttgatgagct 67
>36900_dps-mir-2a-1:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 44 gcatatcacagccagctttgatgagct 70
>36901_dps-mir-2a-2:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 41 gcatatcacagccagctttgatgagct 67
>37112_dse-mir-2a-1:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 46 gcatatcacagccagctttgatgagct 72
>37113_dse-mir-2a-2:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 41 gcatatcacagccagctttgatgagct 67
>37114_dse-mir-2a-3:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 41 gcatatcacagccagctttgatgagct 67
>37191_dsi-mir-2a-1:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 46 gcatatcacagccagctttgatgagct 72
>37192_dsi-mir-2a-2:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 41 gcatatcacagccagctttgatgagct 67
>37328_dvi-mir-2a-1:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 47 gcatatcacagccagctttgatgagct 73
>37329_dvi-mir-2a-2:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 41 gcatatcacagccagctttgatgagct 67
>37404_dwi-mir-2a-2:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 41 gcatatcacagccagctttgatgagct 67
>37481_dya-mir-2a-1:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 46 gcatatcacagccagctttgatgagct 72
>37482_dya-mir-2a-2:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 gcatatcacagccacctttgatgagct 84
|||||||||||||| ||||||||||||
Sbjct: 41 gcatatcacagccagctttgatgagct 67
>35271_aga-mir-2-1:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 catatcacagccacctttgatgagct 84
||||||||||||| ||||||||||||
Sbjct: 56 catatcacagccagctttgatgagct 81
>34960_isc-mir-2a:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 catatcacagccacctttgatgagc 83
||||||||||||| |||||||||||
Sbjct: 59 catatcacagccagctttgatgagc 83
>34996_dpu-mir-2a:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 catatcacagccacctttgatgagc 83
||||||||||||| |||||||||||
Sbjct: 59 catatcacagccagctttgatgagc 83
>35043_api-mir-2a:mirbase
Length = 62
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 catatcacagccacctttgatgagc 83
||||||||||||| |||||||||||
Sbjct: 37 catatcacagccagctttgatgagc 61
>35340_ame-mir-2-1:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 catatcacagccacctttgatgagc 83
||||||||||||| |||||||||||
Sbjct: 52 catatcacagccagctttgatgagc 76
>35515_bmo-mir-2a-2:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 catatcacagccacctttgatgagc 83
||||||||||||| |||||||||||
Sbjct: 50 catatcacagccagctttgatgagc 74
>37687_tca-mir-2a:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 catatcacagccacctttgatgagc 83
||||||||||||| |||||||||||
Sbjct: 50 catatcacagccagctttgatgagc 74
>37688_tca-mir-2a:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 catatcacagccacctttgatgagc 83
||||||||||||| |||||||||||
Sbjct: 50 catatcacagccagctttgatgagc 74
>37689_tca-mir-2b:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 catatcacagccacctttgatgagc 83
||||||||||||| |||||||||||
Sbjct: 48 catatcacagccagctttgatgagc 72
>37690_tca-mir-2b:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 catatcacagccacctttgatgagc 83
||||||||||||| |||||||||||
Sbjct: 48 catatcacagccagctttgatgagc 72
>38848_lgi-mir-2c:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 catatcacagccacctttgatgag 82
||||||||||||| ||||||||||
Sbjct: 57 catatcacagccagctttgatgag 80
