miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35006_dpu-mir-71:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 cctgaaagacatgggtagtgagatg 44
|||||||||||||||||||||||||
Sbjct: 20 cctgaaagacatgggtagtgagatg 44
>35359_ame-mir-71:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 ctgaaagacatgggtagtgagatg 44
||||||||||||||||||||||||
Sbjct: 24 ctgaaagacatgggtagtgagatg 47
>38742_cte-mir-71:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgaaagacatgggtagtgagatg 44
|||||||||||||||||||||||
Sbjct: 22 tgaaagacatgggtagtgagatg 44
>35055_api-mir-71:mirbase
Length = 62
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgaaagacatgggtagtgagatg 44
|||||||||||||||||||||||
Sbjct: 1 tgaaagacatgggtagtgagatg 23
>35532_bmo-mir-71:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgaaagacatgggtagtgagatg 44
|||||||||||||||||||||||
Sbjct: 21 tgaaagacatgggtagtgagatg 43
>37646_nvi-mir-71:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgaaagacatgggtagtgagatg 44
|||||||||||||||||||||||
Sbjct: 26 tgaaagacatgggtagtgagatg 48
>37726_tca-mir-71:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgaaagacatgggtagtgagatg 44
|||||||||||||||||||||||
Sbjct: 10 tgaaagacatgggtagtgagatg 32
>37725_tca-mir-71:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgaaagacatgggtagtgagatg 44
|||||||||||||||||||||||
Sbjct: 10 tgaaagacatgggtagtgagatg 32
>39089_sme-mir-71c:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgaaagacatgggtagtgagat 43
||||||||||||||||||||||
Sbjct: 11 tgaaagacatgggtagtgagat 32
>24665_bfl-mir-71:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgaaagacatgggtagtgagat 43
||||||||||||||||||||||
Sbjct: 22 tgaaagacatgggtagtgagat 43
>34816_spu-mir-71:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgaaagacatgggtagtgagat 43
||||||||||||||||||||||
Sbjct: 22 tgaaagacatgggtagtgagat 43
>38533_crm-mir-71:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgaaagacatgggtagtgaga 42
|||||||||||||||||||||
Sbjct: 30 tgaaagacatgggtagtgaga 50
>35185_aae-mir-71:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 gaaagacatgggtagtgagat 43
|||||||||||||||||||||
Sbjct: 7 gaaagacatgggtagtgagat 27
>36015_cqu-mir-71:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 gaaagacatgggtagtgagat 43
|||||||||||||||||||||
Sbjct: 7 gaaagacatgggtagtgagat 27
>38105_bma-mir-71:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgaaagacatgggtagtgaga 42
|||||||||||||||||||||
Sbjct: 21 tgaaagacatgggtagtgaga 41
>38180_cbr-mir-71:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgaaagacatgggtagtgaga 42
|||||||||||||||||||||
Sbjct: 11 tgaaagacatgggtagtgaga 31
>38307_cel-mir-71:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgaaagacatgggtagtgaga 42
|||||||||||||||||||||
Sbjct: 16 tgaaagacatgggtagtgaga 36
>38860_lgi-mir-71:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 tgaaagacatgggtagtgagatga 45
||||||||| ||||||||||||||
Sbjct: 22 tgaaagacaagggtagtgagatga 45
