miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38108_bma-mir-87a:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 agtgtaggtgagcaaagtttcaggtgt 80
|||||||||||||||||||||||||||
Sbjct: 44 agtgtaggtgagcaaagtttcaggtgt 70
>38550_crm-mir-87:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 gtaggtgagcaaagtttcaggtgtg 81
|||||||||||||||||||||||||
Sbjct: 60 gtaggtgagcaaagtttcaggtgtg 84
>38198_cbr-mir-87:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 gtaggtgagcaaagtttcaggtgtg 81
|||||||||||||||||||||||||
Sbjct: 57 gtaggtgagcaaagtttcaggtgtg 81
>38327_cel-mir-87:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 gtaggtgagcaaagtttcaggtgtg 81
|||||||||||||||||||||||||
Sbjct: 57 gtaggtgagcaaagtttcaggtgtg 81
>38745_cte-mir-87b:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 57 gtaggtgagcaaagtttcaggtgt 80
||||||||||||||||||||||||
Sbjct: 57 gtaggtgagcaaagtttcaggtgt 80
>35056_api-mir-87a:mirbase
Length = 66
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 58 taggtgagcaaagtttcaggtgtg 81
||||||||||||||||||||||||
Sbjct: 42 taggtgagcaaagtttcaggtgtg 65
>35361_ame-mir-87-1:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgtgt 82
||||||||||||||||||||||||
Sbjct: 68 aggtgagcaaagtttcaggtgtgt 91
>38628_ppc-mir-87:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgtg 81
|||||||||||||||||||||||
Sbjct: 59 aggtgagcaaagtttcaggtgtg 81
>35362_ame-mir-87-2:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 ggtgagcaaagtttcaggtgtgt 82
|||||||||||||||||||||||
Sbjct: 69 ggtgagcaaagtttcaggtgtgt 91
>37727_tca-mir-87a:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 ggtgagcaaagtttcaggtgtgt 82
|||||||||||||||||||||||
Sbjct: 51 ggtgagcaaagtttcaggtgtgt 73
>37728_tca-mir-87a:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 60 ggtgagcaaagtttcaggtgtgt 82
|||||||||||||||||||||||
Sbjct: 51 ggtgagcaaagtttcaggtgtgt 73
>37729_tca-mir-87b:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 taggtgagcaaagtttcaggtgtgttg 84
||||||||||||| |||||||||||||
Sbjct: 55 taggtgagcaaagattcaggtgtgttg 81
>37730_tca-mir-87b:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 taggtgagcaaagtttcaggtgtgttg 84
||||||||||||| |||||||||||||
Sbjct: 55 taggtgagcaaagattcaggtgtgttg 81
>38862_lgi-mir-87:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgt 80
||||||||||||||||||||||
Sbjct: 59 aggtgagcaaagtttcaggtgt 80
>38744_cte-mir-87a:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 ggtgagcaaagtttcaggtgtg 81
||||||||||||||||||||||
Sbjct: 60 ggtgagcaaagtttcaggtgtg 81
>38941_emu-mir-87:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 ggtgagcaaagtttcaggtgt 80
|||||||||||||||||||||
Sbjct: 72 ggtgagcaaagtttcaggtgt 92
>38918_egr-mir-87:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 60 ggtgagcaaagtttcaggtgt 80
|||||||||||||||||||||
Sbjct: 72 ggtgagcaaagtttcaggtgt 92
>35534_bmo-mir-87:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgtgtt 83
||||||||||| |||||||||||||
Sbjct: 59 aggtgagcaaactttcaggtgtgtt 83
>35057_api-mir-87b:mirbase
Length = 63
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgtgt 82
||||||||||||||||||| ||||
Sbjct: 40 aggtgagcaaagtttcaggcgtgt 63
>35187_aae-mir-87:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgtgt 82
||||||||||| ||||||||||||
Sbjct: 64 aggtgagcaaattttcaggtgtgt 87
>36017_cqu-mir-87:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 aggtgagcaaagtttcaggtgtgt 82
||||||||||| ||||||||||||
Sbjct: 47 aggtgagcaaattttcaggtgtgt 70
