miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40512_gma-MIR1520k:mirbase
Length = 128
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 35 actaatcagaacataacacgtgacaatcatca 66
|||||||||||||| |||||||||||||||||
Sbjct: 43 actaatcagaacatgacacgtgacaatcatca 12
>40508_gma-MIR1520g:mirbase
Length = 108
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 38 aatcagaacataacacgtgacaatcatca 66
||||||||||| |||||||||||||||||
Sbjct: 79 aatcagaacatgacacgtgacaatcatca 107
>40507_gma-MIR1520f:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 37 taatcagaacataacacgtgacaatc 62
|||||||||||| |||||||||||||
Sbjct: 41 taatcagaacatgacacgtgacaatc 16
>40513_gma-MIR1520l:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 38 aatcagaacataacacgtgacaatcatca 66
|||||||| || |||||||||||||||||
Sbjct: 31 aatcagaatatgacacgtgacaatcatca 3
>40505_gma-MIR1520d:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 38 aatcagaacataacacgtgacaatcatca 66
||||||||||| |||||||||||| ||||
Sbjct: 79 aatcagaacatgacacgtgacaattatca 107
>40503_gma-MIR1520b:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 38 aatcagaacataacacgtgacaatcatca 66
||||||||||| |||||||||| ||||||
Sbjct: 81 aatcagaacatgacacgtgacagtcatca 109
>40510_gma-MIR1520i:mirbase
Length = 144
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 38 aatcagaacataacacgtgacaatcat 64
||||||||||| |||||||||| ||||
Sbjct: 64 aatcagaacatgacacgtgacagtcat 38
