miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>35389_ame-mir-305:mirbase
          Length = 90

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 10 gttaattgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||||||
Sbjct: 12 gttaattgtacttcatcaggtgctctgg 39




>37591_ngi-mir-305:mirbase
          Length = 88

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 10 gttaattgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||||||
Sbjct: 12 gttaattgtacttcatcaggtgctctgg 39




>37622_nlo-mir-305:mirbase
          Length = 88

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 10 gttaattgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||||||
Sbjct: 12 gttaattgtacttcatcaggtgctctgg 39




>37666_nvi-mir-305:mirbase
          Length = 90

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 10 gttaattgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||||||
Sbjct: 12 gttaattgtacttcatcaggtgctctgg 39




>35218_aae-mir-305:mirbase
          Length = 88

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 15 attgtacttcatcaggtgctctgg 38




>35309_aga-mir-305:mirbase
          Length = 90

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 15 attgtacttcatcaggtgctctgg 38




>35561_bmo-mir-305:mirbase
          Length = 91

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 17 attgtacttcatcaggtgctctgg 40




>36041_cqu-mir-305:mirbase
          Length = 88

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 15 attgtacttcatcaggtgctctgg 38




>36134_dan-mir-305:mirbase
          Length = 73

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 8  attgtacttcatcaggtgctctgg 31




>36212_der-mir-305:mirbase
          Length = 73

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 8  attgtacttcatcaggtgctctgg 31




>36302_dgr-mir-305:mirbase
          Length = 73

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 8  attgtacttcatcaggtgctctgg 31




>36445_dme-mir-305:mirbase
          Length = 73

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 8  attgtacttcatcaggtgctctgg 31




>36446_dme-mir-305:mirbase
          Length = 73

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 8  attgtacttcatcaggtgctctgg 31




>36808_dmo-mir-305:mirbase
          Length = 73

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 8  attgtacttcatcaggtgctctgg 31




>36884_dpe-mir-305:mirbase
          Length = 73

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 8  attgtacttcatcaggtgctctgg 31




>36966_dps-mir-305:mirbase
          Length = 73

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 8  attgtacttcatcaggtgctctgg 31




>37172_dse-mir-305:mirbase
          Length = 73

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 8  attgtacttcatcaggtgctctgg 31




>37385_dvi-mir-305:mirbase
          Length = 73

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 8  attgtacttcatcaggtgctctgg 31




>37464_dwi-mir-305:mirbase
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 8  attgtacttcatcaggtgctctgg 31




>37541_dya-mir-305:mirbase
          Length = 73

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 8  attgtacttcatcaggtgctctgg 31




>37788_tca-mir-305:mirbase
          Length = 75

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 10 attgtacttcatcaggtgctctgg 33




>37789_tca-mir-305:mirbase
          Length = 75

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attgtacttcatcaggtgctctgg 37
          ||||||||||||||||||||||||
Sbjct: 10 attgtacttcatcaggtgctctgg 33