miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>35392_ame-mir-315:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 gcttttgattgttgctcagaa 39
          |||||||||||||||||||||
Sbjct: 10 gcttttgattgttgctcagaa 30





>37623_nlo-mir-315:mirbase
          Length = 75

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 gcttttgattgttgctcagaa 39
          |||||||||||||||||||||
Sbjct: 10 gcttttgattgttgctcagaa 30





>37668_nvi-mir-315:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 gcttttgattgttgctcagaa 39
          |||||||||||||||||||||
Sbjct: 10 gcttttgattgttgctcagaa 30





>37798_tca-mir-315:mirbase
          Length = 79

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 gcttttgattgttgctcagaa 39
          |||||||||||||||||||||
Sbjct: 10 gcttttgattgttgctcagaa 30





>38885_lgi-mir-315:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 12 cttctcagcttttgattgttgctcagaa 39
          |||||||  |||||||||||||||||||
Sbjct: 12 cttctcaaattttgattgttgctcagaa 39





>38775_cte-mir-315:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 20 cttttgattgttgctcagaa 39
          ||||||||||||||||||||
Sbjct: 20 cttttgattgttgctcagaa 39