miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35032_dpu-mir-317:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtatatcagtc 86
|||||||||||||||||||| ||||||
Sbjct: 60 gtgaacacagctggtggtatctcagtc 86
>35227_aae-mir-317-1:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtatatcagt 85
|||||||||||||||||||| |||||
Sbjct: 54 gtgaacacagctggtggtatctcagt 79
>35228_aae-mir-317-2:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtatatcagt 85
|||||||||||||||||||| |||||
Sbjct: 52 gtgaacacagctggtggtatctcagt 77
>35394_ame-mir-317:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtatatcagt 85
|||||||||||||||||||| |||||
Sbjct: 54 gtgaacacagctggtggtatctcagt 79
>35567_bmo-mir-317:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtatatcagt 85
|||||||||||||||||||| |||||
Sbjct: 54 gtgaacacagctggtggtatctcagt 79
>36047_cqu-mir-317:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtatatcagt 85
|||||||||||||||||||| |||||
Sbjct: 54 gtgaacacagctggtggtatctcagt 79
>37592_ngi-mir-317:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtatatcagt 85
|||||||||||||||||||| |||||
Sbjct: 51 gtgaacacagctggtggtatctcagt 76
>37669_nvi-mir-317:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtatatcagt 85
|||||||||||||||||||| |||||
Sbjct: 54 gtgaacacagctggtggtatctcagt 79
>37801_tca-mir-317:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtatatcagt 85
|||||||||||||||||||| |||||
Sbjct: 45 gtgaacacagctggtggtatctcagt 70
>37802_tca-mir-317:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtatatcagt 85
|||||||||||||||||||| |||||
Sbjct: 45 gtgaacacagctggtggtatctcagt 70
>38886_lgi-mir-317:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgtgaacacagctggtggtat 79
|||||||||||||||||||||
Sbjct: 59 tgtgaacacagctggtggtat 79
>38776_cte-mir-317:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 tgtgaacacagctggtggtat 79
|||||||||||||||||||||
Sbjct: 59 tgtgaacacagctggtggtat 79
>35087_api-mir-317:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 56 gtgaacacagctggtggtat 75
>36146_dan-mir-317:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtat 73
>36228_der-mir-317:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtat 74
>36311_dgr-mir-317:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtat 74
>36471_dme-mir-317:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtat 74
>36472_dme-mir-317:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtat 74
>36817_dmo-mir-317:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 52 gtgaacacagctggtggtat 71
>36892_dpe-mir-317-1:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtat 73
>36893_dpe-mir-317-2:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtat 73
>36976_dps-mir-317:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtat 73
>37184_dse-mir-317:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtat 74
>37260_dsi-mir-317:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtat 74
>37396_dvi-mir-317:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 52 gtgaacacagctggtggtat 71
>37473_dwi-mir-317:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 53 gtgaacacagctggtggtat 72
>37555_dya-mir-317:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 60 gtgaacacagctggtggtat 79
||||||||||||||||||||
Sbjct: 55 gtgaacacagctggtggtat 74
