miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35396_ame-mir-375:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 tttgttcgttcggctcgagtta 82
||||||||||||||||||||||
Sbjct: 63 tttgttcgttcggctcgagtta 84
>37593_ngi-mir-375:mirbase
Length = 70
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 tttgttcgttcggctcgagtta 82
||||||||||||||||||||||
Sbjct: 46 tttgttcgttcggctcgagtta 67
>37670_nvi-mir-375:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 61 tttgttcgttcggctcgagtta 82
||||||||||||||||||||||
Sbjct: 65 tttgttcgttcggctcgagtta 86
>38887_lgi-mir-375:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 tgttttgttcgttcggctcgagtta 82
|||||||||||||||||||| ||||
Sbjct: 58 tgttttgttcgttcggctcgcgtta 82
>26024_gga-mir-375:mirbase
Length = 65
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgagttag 83
||||||||||||||||||| |||||
Sbjct: 39 gttttgttcgttcggctcgcgttag 63
>26528_tgu-mir-375:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgagttag 83
||||||||||||||||||| |||||
Sbjct: 39 gttttgttcgttcggctcgcgttag 63
>24704_bfl-mir-375:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgagtta 82
||||||||||||||||||| ||||
Sbjct: 59 gttttgttcgttcggctcgcgtta 82
>25853_xtr-mir-375:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgagtta 82
||||||||||||||||||| ||||
Sbjct: 39 gttttgttcgttcggctcgcgtta 62
>34398_dre-mir-375-1:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgagtta 82
||||||||||||||||||| ||||
Sbjct: 47 gttttgttcgttcggctcgcgtta 70
>34399_dre-mir-375-2:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgagtta 82
||||||||||||||||||| ||||
Sbjct: 50 gttttgttcgttcggctcgcgtta 73
>34651_fru-mir-375:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgagtta 82
||||||||||||||||||| ||||
Sbjct: 47 gttttgttcgttcggctcgcgtta 70
>34799_tni-mir-375:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 gttttgttcgttcggctcgagtta 82
||||||||||||||||||| ||||
Sbjct: 47 gttttgttcgttcggctcgcgtta 70
>34837_spu-mir-375:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgttttgttcgttcggctcg 77
||||||||||||||||||||
Sbjct: 58 tgttttgttcgttcggctcg 77
