miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38781_cte-mir-750:mirbase
          Length = 99

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 58 gtgccagatctaactcttccagctca 83
          ||||||||||||||||||||||||||
Sbjct: 56 gtgccagatctaactcttccagctca 81

>35397_ame-mir-750:mirbase
          Length = 136

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 59  tgccagatctaactcttccagctca 83
           |||||||||||||||||||||||||
Sbjct: 82  tgccagatctaactcttccagctca 106

>38890_lgi-mir-750:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 62 cagatctaactcttccagctca 83
          ||||||||||||||||||||||
Sbjct: 61 cagatctaactcttccagctca 82

>37805_tca-mir-750:mirbase
          Length = 92

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgccagatctaactcttcca 78
          ||||||||||||||||||||
Sbjct: 52 tgccagatctaactcttcca 71

>37806_tca-mir-750:mirbase
          Length = 92

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgccagatctaactcttcca 78
          ||||||||||||||||||||
Sbjct: 52 tgccagatctaactcttcca 71