miRNEST 2.0, an integrative microRNA resource :: BLAST
>40516_gma-MIR1520o:mirbase
Length = 193
Score = 63.9 bits (32), Expect = 9e-11
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 232 acacgtgacagttatcgtccaatcagaacgtgacacgtgacagtcaaaattcatttgtaa 291
|||| ||||||||||| ||||||||||| ||||||| ||||| |||| |||| |||||||
Sbjct: 60 acacatgacagttatcatccaatcagaatgtgacacatgacaatcaatattcttttgtaa 1
Score = 61.9 bits (31), Expect = 4e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 245 atcgtccaatcagaacgtgacacgtgacagtcaaaattcatttgtaa 291
||||||||||||||| |||||| ||||||||||| |||| |||||||
Sbjct: 147 atcgtccaatcagaatgtgacatgtgacagtcaacattcttttgtaa 193
Score = 46.1 bits (23), Expect = 2e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 109 ttacaaaagaatattgatggtcacgtgtcac 139
|||||||||||||||||| |||| |||||||
Sbjct: 1 ttacaaaagaatattgattgtcatgtgtcac 31
>40510_gma-MIR1520i:mirbase
Length = 144
Score = 61.9 bits (31), Expect = 4e-10
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 228 catgacacgtgacagttatcgtccaatcagaacgtgacacgtgacagtcaa 278
|||||||||||||||| || |||||| |||||||||||||||| ||||||
Sbjct: 56 catgacacgtgacagtcataatccaataagaacgtgacacgtgatagtcaa 6
Score = 48.1 bits (24), Expect = 5e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 250 ccaatcagaacgtgacacgtgacagtca 277
||||||||||| ||||||||||||||||
Sbjct: 66 ccaatcagaacatgacacgtgacagtca 39
>40506_gma-MIR1520e:mirbase
Length = 164
Score = 61.9 bits (31), Expect = 4e-10
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 229 atgacacgtgacagttatcgtccaatcagaacgtgacacgtgacagt 275
|||||| |||||||| ||| |||||||||||||||| ||||||||||
Sbjct: 49 atgacatgtgacagtcatcatccaatcagaacgtgatacgtgacagt 3
Score = 52.0 bits (26), Expect = 3e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 228 catgacacgtgacagttatcgtccaatcagaacgtgacacgtgacagtca 277
|||||||||||||||| || |||||| ||||||||||| |||||||||
Sbjct: 115 catgacacgtgacagtcgtcatccaataagaacgtgacatatgacagtca 164
Score = 48.1 bits (24), Expect = 5e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 249 tccaatcagaacgtgacacgtgacagtc 276
|||||||||||| |||||||||||||||
Sbjct: 104 tccaatcagaacatgacacgtgacagtc 131
>40503_gma-MIR1520b:mirbase
Length = 129
Score = 50.1 bits (25), Expect = 1e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 249 tccaatcagaacgtgacacgtgacagtca 277
|||||||||||| ||||||||||||||||
Sbjct: 78 tccaatcagaacatgacacgtgacagtca 106
>40514_gma-MIR1520m:mirbase
Length = 128
Score = 48.1 bits (24), Expect = 5e-06
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 145 attgaacgataattgccacttgttatgttctgattgaccaatgattacaagaatgcattt 204
|||||| |||||||| ||| ||| ||||||||||||| ||||| |||| ||| |||||
Sbjct: 123 attgaatgataattgtcacatgtcatgttctgattgataaatgaaaacaacaattcattt 64
Query: 205 catc 208
||||
Sbjct: 63 catc 60
>40508_gma-MIR1520g:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 2e-05
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 156 attgccacttgttatgttctgattgaccaatgattacaagaatgcatttcatcgtccat 214
|||| ||| ||| ||||||||||||| ||||||| |||| |||| |||| ||| |||||
Sbjct: 102 attgtcacgtgtcatgttctgattgatcaatgataacaataatgtattttatcttccat 44
>40511_gma-MIR1520j:mirbase
Length = 176
Score = 44.1 bits (22), Expect = 8e-05
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 234 acgtgacagttatcgtccaatcagaacgtgacacgtgacagtcaaaattc 283
|||||||| | ||| | |||| ||||||||||| ||||||||||| ||||
Sbjct: 50 acgtgacaatcatcattcaataagaacgtgacatgtgacagtcaacattc 1
>40515_gma-MIR1520n:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 251 caatcagaacgtgacacgtgacagt 275
|||||||||| ||||||||||||||
Sbjct: 72 caatcagaacatgacacgtgacagt 96
>40512_gma-MIR1520k:mirbase
Length = 128
Score = 42.1 bits (21), Expect = 3e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 249 tccaatcagaacgtgacacgtgacagtca 277
|||||||||||| |||||| |||||||||
Sbjct: 86 tccaatcagaacatgacacatgacagtca 114
>40505_gma-MIR1520d:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 3e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 152 gataattgccacttgttatgttctgattgaccaatga 188
|||||||| ||| ||| ||||||||||||| ||||||
Sbjct: 106 gataattgtcacgtgtcatgttctgattgatcaatga 70
>40504_gma-MIR1520c:mirbase
Length = 140
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 251 caatcagaacgtgacacgtgacagt 275
|||| ||||||||||||||||||||
Sbjct: 110 caataagaacgtgacacgtgacagt 134
