miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>34820_spu-mir-92c:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 62 attgcactcgtcccggcctgc 82
          |||||||||||||||||||||
Sbjct: 62 attgcactcgtcccggcctgc 82

>24669_bfl-mir-92b:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 62 attgcactcgtcccggcctg 81
          ||||||||||||||||||||
Sbjct: 62 attgcactcgtcccggcctg 81

>34875_sko-mir-92c:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 62 attgcactcgtcccggcctg 81
          ||||||||||||||||||||
Sbjct: 62 attgcactcgtcccggcctg 81

>34949_xbo-mir-92a:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 62 attgcactcgtcccggcctg 81
          ||||||||||||||||||||
Sbjct: 51 attgcactcgtcccggcctg 70

>38110_bma-mir-92:mirbase
          Length = 105

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 62 attgcactcgtcccggcctg 81
          ||||||||||||||||||||
Sbjct: 68 attgcactcgtcccggcctg 87