miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36537_dme-mir-981:mirbase
          Length = 97

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 gttcgttgtcgacgaaacctgcat 83
          ||||||||||||||||||||||||
Sbjct: 60 gttcgttgtcgacgaaacctgcat 83




>36538_dme-mir-981:mirbase
          Length = 97

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 gttcgttgtcgacgaaacctgcat 83
          ||||||||||||||||||||||||
Sbjct: 60 gttcgttgtcgacgaaacctgcat 83




>36992_dps-mir-981:mirbase
          Length = 89

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 gttcgttgtcgacgaaacctgcat 83
          ||||||||||||||||||||||||
Sbjct: 55 gttcgttgtcgacgaaacctgcat 78




>37286_dsi-mir-981:mirbase
          Length = 117

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 60 gttcgttgtcgacgaaacctgcat 83
          ||||||||||||||||||||||||
Sbjct: 68 gttcgttgtcgacgaaacctgcat 91




>35238_aae-mir-981:mirbase
          Length = 91

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 gttcgttgtcgacgaaacctgca 82
          |||||||||||||||||||||||
Sbjct: 57 gttcgttgtcgacgaaacctgca 79




>36054_cqu-mir-981:mirbase
          Length = 99

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 gttcgttgtcgacgaaacctgca 82
          |||||||||||||||||||||||
Sbjct: 61 gttcgttgtcgacgaaacctgca 83




>37819_tca-mir-981:mirbase
          Length = 96

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 60 gttcgttgtcgacgaaacctgca 82
          |||||||||||||||||||||||
Sbjct: 60 gttcgttgtcgacgaaacctgca 82




>38891_lgi-mir-981:mirbase
          Length = 69

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gttcgttgtcgacgaaacctgc 81
          ||||||||||||||||||||||
Sbjct: 42 gttcgttgtcgacgaaacctgc 63




>35324_aga-mir-981:mirbase
          Length = 95

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 61 ttcgttgtcgacgaaacctgca 82
          ||||||||||||||||||||||
Sbjct: 63 ttcgttgtcgacgaaacctgca 84