miRNEST 2.0, an integrative microRNA resource :: BLAST
>40454_gma-MIR171a:mirbase
Length = 102
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 2 gttcaacgggatattggtccggttcaataagaaagcaatgctcaaaatgtttttgggtcc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttcaacgggatattggtccggttcaataagaaagcaatgctcaaaatgtttttgggtcc 60
Query: 62 tgttttttcattgagccgtgccaatatcacgaaccac 98
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttttttcattgagccgtgccaatatcacgaaccac 97
>40359_rco-MIR171a:mirbase
Length = 92
Score = 109 bits (55), Expect = 4e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 6 aacgggatattggtccggttcaataagaaagcaatgctcaaaatgtttttgggtcctgtt 65
|||||||||||||||||||||||||||||| || ||||||||||| || |||| |||| |
Sbjct: 2 aacgggatattggtccggttcaataagaaaacagtgctcaaaatg-ttatgggccctgct 60
Query: 66 ttttcattgagccgtgccaatatcacg 92
|||| ||||||||||||||||||||||
Sbjct: 61 ttttgattgagccgtgccaatatcacg 87
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 99.6 bits (50), Expect = 4e-22
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 7 acgggatattggtccggttcaataagaaagcaatgctcaaaatgtttttgggtcctgttt 66
||||||||||||| |||||||||||||||||| ||||| ||| |||||| || ||| ||
Sbjct: 8 acgggatattggtgcggttcaataagaaagcagtgctcgcaatctttttgagttctggtt 67
Query: 67 tttcattgagccgtgccaatatcacg 92
||| ||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatcacg 93
>41216_crt-MIR171:mirbase
Length = 201
Score = 63.9 bits (32), Expect = 2e-11
Identities = 75/88 (85%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 5 caacgggatattggtccggttcaataagaaagcaatgctcaaaatgtttttgggtcctgt 64
||||||||||||||| ||||||||||||||| | ||||||| | |||||| | | |
Sbjct: 98 caacgggatattggtgcggttcaataagaaaacggtgctcaata-ctttttgagctccgc 156
Query: 65 tttttcattgagccgtgccaatatcacg 92
||||| ||||||||||||||||||||||
Sbjct: 157 tttttgattgagccgtgccaatatcacg 184
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 6 aacgggatattggtccggttcaataagaaagcaatgctc 44
|||||||||||||| ||||||||| |||||| |||||||
Sbjct: 9 aacgggatattggtacggttcaatcagaaagtaatgctc 47
>41231_csi-MIR171a:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 8e-08
Identities = 72/86 (83%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 7 acgggatattggtccggttcaataagaaagcaatgctcaaaatgtttttgggtcctgttt 66
||||||||||||| ||||||||||||||| | ||||||| | |||||| | | | ||
Sbjct: 6 acgggatattggtgcggttcaataagaaaacggtgctcaata-ctttttgagctccgctt 64
Query: 67 tttcattgagccgtgccaatatcacg 92
||| ||||||||| ||||||||||||
Sbjct: 65 tttgattgagccgcgccaatatcacg 90
>41211_ccl-MIR171:mirbase
Length = 321
Score = 52.0 bits (26), Expect = 8e-08
Identities = 72/86 (83%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 7 acgggatattggtccggttcaataagaaagcaatgctcaaaatgtttttgggtcctgttt 66
||||||||||||| ||||||||||||||| | ||||||| | |||||| | | | ||
Sbjct: 61 acgggatattggtgcggttcaataagaaaacggtgctcaata-ctttttgagctccgctt 119
Query: 67 tttcattgagccgtgccaatatcacg 92
||| ||||||||| ||||||||||||
Sbjct: 120 tttgattgagccgcgccaatatcacg 145
>41983_osa-MIR171c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 6 aacgggatattggtccggttcaataagaaagc 37
|||||||||||||| ||||||||| |||||||
Sbjct: 6 aacgggatattggtgcggttcaatcagaaagc 37
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 71 attgagccgtgccaatatcacg 92
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 61 ctgttttttcattgagccgtgccaatatcacg 92
||||| ||| ||||||||||||||||||||||
Sbjct: 59 ctgttgtttgattgagccgtgccaatatcacg 90
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 61 ctgttttttcattgagccgtgccaatatcacg 92
||||| ||| ||||||||||||||||||||||
Sbjct: 69 ctgttatttgattgagccgtgccaatatcacg 100
>42763_zma-MIR171c:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 7 acgggatattggtccggttcaataagaaagc 37
||||||||||||| ||||||||| |||||||
Sbjct: 17 acgggatattggtgcggttcaatcagaaagc 47
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 tgagccgtgccaatatcacg 92
||||||||||||||||||||
Sbjct: 83 tgagccgtgccaatatcacg 102
>41982_osa-MIR171b:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 66 ttttcattgagccgtgccaatatcacg 92
|||| ||||||||||||||||||||||
Sbjct: 67 ttttgattgagccgtgccaatatcacg 93
>41182_aqc-MIR171f:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 62 tgttttttcattgagccgtgccaatatcacg 92
|||| ||| ||||||||||||||||||||||
Sbjct: 55 tgttatttaattgagccgtgccaatatcacg 85
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 62 tgttttttcattgagccgtgccaatatcacg 92
|||| ||| ||||||||||||||||||||||
Sbjct: 60 tgttatttgattgagccgtgccaatatcacg 90
>40360_rco-MIR171b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 62 tgttttttcattgagccgtgccaatatcacg 92
|||| ||| ||||||||||||||||||||||
Sbjct: 56 tgttgtttgattgagccgtgccaatatcacg 86
>40305_bol-MIR171a:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacga 93
|||||||||||||||||||||||
Sbjct: 70 attgagccgtgccaatatcacga 92
>40289_bna-MIR171e:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacga 93
|||||||||||||||||||||||
Sbjct: 69 attgagccgtgccaatatcacga 91
>40288_bna-MIR171d:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacga 93
|||||||||||||||||||||||
Sbjct: 70 attgagccgtgccaatatcacga 92
>42770_zma-MIR171j:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 92 attgagccgtgccaatatcacg 113
>42762_zma-MIR171b:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcacg 85
>42641_tae-MIR171b:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 91 attgagccgtgccaatatcacg 112
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcacg 85
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 95 attgagccgtgccaatatcacg 116
>41539_sly-MIR171b:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcacg 85
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 73 attgagccgtgccaatatcacg 94
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 79 attgagccgtgccaatatcacg 100
>40457_gma-MIR171c:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 62 tgttttttcattgagccgtgccaatatcac 91
|||| ||| |||||||||||||||||||||
Sbjct: 65 tgttatttgattgagccgtgccaatatcac 94
>40321_bra-MIR171d:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 72 attgagccgtgccaatatcacg 93
>40320_bra-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 66 attgagccgtgccaatatcacg 87
>40319_bra-MIR171b:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 73 attgagccgtgccaatatcacg 94
>40318_bra-MIR171a:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 64 attgagccgtgccaatatcacg 85
>40287_bna-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 66 attgagccgtgccaatatcacg 87
>40286_bna-MIR171b:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 72 attgagccgtgccaatatcacg 93
>40285_bna-MIR171a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 73 attgagccgtgccaatatcacg 94
>40062_ath-MIR171c:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 89 attgagccgtgccaatatcacg 110
>40061_ath-MIR171b:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 77 attgagccgtgccaatatcacg 98
>39851_aly-MIR171c:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 76 attgagccgtgccaatatcacg 97
>39850_aly-MIR171b:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcacg 92
||||||||||||||||||||||
Sbjct: 88 attgagccgtgccaatatcacg 109
>42769_zma-MIR171i:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcac 91
|||||||||||||||||||||
Sbjct: 67 attgagccgtgccaatatcac 87
>42766_zma-MIR171f:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcac 91
|||||||||||||||||||||
Sbjct: 117 attgagccgtgccaatatcac 137
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcac 91
|||||||||||||||||||||
Sbjct: 124 attgagccgtgccaatatcac 144
>41986_osa-MIR171f:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcac 91
|||||||||||||||||||||
Sbjct: 99 attgagccgtgccaatatcac 119
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcac 91
|||||||||||||||||||||
Sbjct: 66 attgagccgtgccaatatcac 86
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcac 91
|||||||||||||||||||||
Sbjct: 73 attgagccgtgccaatatcac 93
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcac 91
|||||||||||||||||||||
Sbjct: 73 attgagccgtgccaatatcac 93
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcac 91
|||||||||||||||||||||
Sbjct: 57 attgagccgtgccaatatcac 77
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcac 91
|||||||||||||||||||||
Sbjct: 77 attgagccgtgccaatatcac 97
>39736_smo-MIR171a:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatcac 91
|||||||||||||||||||||
Sbjct: 104 attgagccgtgccaatatcac 124
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatca 90
||||||||||||||||||||
Sbjct: 71 attgagccgtgccaatatca 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 71 attgagccgtgccaatatca 90
||||||||||||||||||||
Sbjct: 70 attgagccgtgccaatatca 89
>41540_sly-MIR171c:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 65 tttttcattgagccgtgccaatatcacg 92
||||| ||||||||| ||||||||||||
Sbjct: 74 tttttgattgagccgcgccaatatcacg 101
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 ttttcattgagccgtgccaatatc 89
|||| |||||||||||||||||||
Sbjct: 81 ttttgattgagccgtgccaatatc 104
>41179_aqc-MIR171c:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 62 tgttttttcattgagccgtgccaatatc 89
|||| ||| |||||||||||||||||||
Sbjct: 28 tgttatttaattgagccgtgccaatatc 1
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 ttttcattgagccgtgccaatatc 89
|||| |||||||||||||||||||
Sbjct: 118 ttttgattgagccgtgccaatatc 141
>40364_rco-MIR171f:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 ttttcattgagccgtgccaatatc 89
|||| |||||||||||||||||||
Sbjct: 83 ttttgattgagccgtgccaatatc 106
>39737_smo-MIR171b:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 ttgagccgtgccaatatcac 91
||||||||||||||||||||
Sbjct: 71 ttgagccgtgccaatatcac 90
