miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40629_gma-MIR4414:mirbase
Length = 128
Score = 254 bits (128), Expect = 4e-68
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 102 actgaaactcagctgctgactcgttggctcgagagttcaccattaagatagattgatgtt 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgaaactcagctgctgactcgttggctcgagagttcaccattaagatagattgatgtt 60
Query: 162 cggcactcacgccatgtaattaaggtggtgtgcttctgatccaacgatgcgggagctgca 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggcactcacgccatgtaattaaggtggtgtgcttctgatccaacgatgcgggagctgca 120
Query: 222 ttcagtcg 229
||||||||
Sbjct: 121 ttcagtcg 128
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 75.8 bits (38), Expect = 2e-14
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 198 tgatccaacgatgcgggagctgcattcagtcgtgactgtcacgtcttggactgaaggg 255
|||||||||||||| |||||||| |||||| || |||||||||||||||||||||||
Sbjct: 118 tgatccaacgatgcaggagctgcgttcagttatggctgtcacgtcttggactgaaggg 175
>40368_rco-MIR319b:mirbase
Length = 179
Score = 52.0 bits (26), Expect = 3e-07
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 198 tgatccaacgatgcgggagctgcattcagtcgtgactgtcacgtcttggactgaaggg 255
||||||||||| || ||||||| |||||| || |||||| ||||||||||||||||
Sbjct: 109 tgatccaacgaagctggagctgtgttcagttatggctgtcatgtcttggactgaaggg 166
