miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34894_sko-mir-278:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 45 tcggtgggactttcgttcgttt 66
||||||||||||||||||||||
Sbjct: 61 tcggtgggactttcgttcgttt 82
>38772_cte-mir-278:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 45 tcggtgggactttcgttcgtt 65
|||||||||||||||||||||
Sbjct: 61 tcggtgggactttcgttcgtt 81
>34836_spu-mir-278:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcg 63
|||||||||||||||||||||
Sbjct: 59 ggtcggtgggactttcgttcg 79
>38882_lgi-mir-278:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 45 tcggtgggactttcgttcgt 64
||||||||||||||||||||
Sbjct: 61 tcggtgggactttcgttcgt 80
>35208_aae-mir-278:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 49 ggtcggtgggactttcgtccgttt 72
>35303_aga-mir-278:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 52 ggtcggtgggactttcgtccgttt 75
>35382_ame-mir-278:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 55 ggtcggtgggactttcgtccgttt 78
>36036_cqu-mir-278:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 65 ggtcggtgggactttcgtccgttt 88
>36120_dan-mir-278:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 55 ggtcggtgggactttcgtccgttt 78
>36198_der-mir-278:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 55 ggtcggtgggactttcgtccgttt 78
>36287_dgr-mir-278:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 56 ggtcggtgggactttcgtccgttt 79
>36419_dme-mir-278:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 55 ggtcggtgggactttcgtccgttt 78
>36420_dme-mir-278:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 55 ggtcggtgggactttcgtccgttt 78
>36795_dmo-mir-278:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 57 ggtcggtgggactttcgtccgttt 80
>36872_dpe-mir-278:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 55 ggtcggtgggactttcgtccgttt 78
>36952_dps-mir-278:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 55 ggtcggtgggactttcgtccgttt 78
>37158_dse-mir-278:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 55 ggtcggtgggactttcgtccgttt 78
>37236_dsi-mir-278:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 55 ggtcggtgggactttcgtccgttt 78
>37372_dvi-mir-278:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 56 ggtcggtgggactttcgtccgttt 79
>37451_dwi-mir-278:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 55 ggtcggtgggactttcgtccgttt 78
>37527_dya-mir-278:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 43 ggtcggtgggactttcgttcgttt 66
|||||||||||||||||| |||||
Sbjct: 55 ggtcggtgggactttcgtccgttt 78
