miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35298_aga-mir-263b:mirbase
Length = 96
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 gaccaattacgaaccttggcactgggagaattcacag 37
||||||||| | |||||||||||||||||||||||||
Sbjct: 2 gaccaattatggaccttggcactgggagaattcacag 38
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 ttctgtggatcttttcgtgccatcgtt 80
|||||||||||||||||||||||||||
Sbjct: 57 ttctgtggatcttttcgtgccatcgtt 83
>37764_tca-mir-263b:mirbase
Length = 75
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 ttacgaaccttggcactgggagaattcacag 37
||||||||||||||||||| |||||||||||
Sbjct: 2 ttacgaaccttggcactggaagaattcacag 32
>37763_tca-mir-263b:mirbase
Length = 75
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 7 ttacgaaccttggcactgggagaattcacag 37
||||||||||||||||||| |||||||||||
Sbjct: 2 ttacgaaccttggcactggaagaattcacag 32
>35546_bmo-mir-263b:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 ccttggcactgggagaattcacagg 38
|||||||||||||||||||||||||
Sbjct: 14 ccttggcactgggagaattcacagg 38
>36114_dan-mir-263b:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 15 cttggcactgggagaattcacag 37
>36192_der-mir-263b:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>36281_dgr-mir-263b:mirbase
Length = 75
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 9 cttggcactgggagaattcacag 31
>36407_dme-mir-263b:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>36408_dme-mir-263b:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>36866_dpe-mir-263b:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>36945_dps-mir-263b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>37152_dse-mir-263b:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>37231_dsi-mir-263b:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>37366_dvi-mir-263b:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 6 cttggcactgggagaattcacag 28
>37445_dwi-mir-263b:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 3 cttggcactgggagaattcacag 25
>37520_dya-mir-263b-1:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 15 cttggcactgggagaattcacag 37
>37521_dya-mir-263b-2:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 cttggcactgggagaattcacag 37
|||||||||||||||||||||||
Sbjct: 15 cttggcactgggagaattcacag 37
>35020_dpu-mir-263b:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 ccttggcactgggagaattcacag 37
|||||||||||| |||||||||||
Sbjct: 6 ccttggcactggaagaattcacag 29
