miRNEST 2.0, an integrative microRNA resource :: BLAST
>36033_cqu-mir-276-2:mirbase
Length = 107
Score = 147 bits (74), Expect = 2e-36
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 3 tggtgattgccatcagcgaggtatagagttcctacgttgcgtgtgcgaaattggtaggaa 62
||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||
Sbjct: 9 tggtgattgccatcagcgaggtatagagttcctacgttgcgagttcgaaatcggtaggaa 68
Query: 63 cttcataccgtgctcttggctagccg 88
||||||||||||||||||||||||||
Sbjct: 69 cttcataccgtgctcttggctagccg 94
>36869_dpe-mir-276a:mirbase
Length = 89
Score = 73.8 bits (37), Expect = 2e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgttgcgtgtgcgaaattggtaggaacttcat 68
|||||||||||||||||||||||||||||||| | | | ||| | |||||||||||||
Sbjct: 9 ttgccatcagcgaggtatagagttcctacgtt-catattataaactcgtaggaacttcat 67
Query: 69 accgtgctcttgg 81
|||||||||||||
Sbjct: 68 accgtgctcttgg 80
>36948_dps-mir-276a:mirbase
Length = 99
Score = 73.8 bits (37), Expect = 2e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgttgcgtgtgcgaaattggtaggaacttcat 68
|||||||||||||||||||||||||||||||| | | | ||| | |||||||||||||
Sbjct: 9 ttgccatcagcgaggtatagagttcctacgtt-catattataaactcgtaggaacttcat 67
Query: 69 accgtgctcttgg 81
|||||||||||||
Sbjct: 68 accgtgctcttgg 80
>37448_dwi-mir-276a:mirbase
Length = 89
Score = 73.8 bits (37), Expect = 2e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgttgcgtgtgcgaaattggtaggaacttcat 68
|||||||||||||||||||||||||||||||| | | | ||| | |||||||||||||
Sbjct: 9 ttgccatcagcgaggtatagagttcctacgtt-catttaataaactcgtaggaacttcat 67
Query: 69 accgtgctcttgg 81
|||||||||||||
Sbjct: 68 accgtgctcttgg 80
>35300_aga-mir-276:mirbase
Length = 92
Score = 69.9 bits (35), Expect = 3e-13
Identities = 75/87 (86%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 4 ggtgattgccatcagcgaggtatagagttcctacgttgcgtgtgcgaaa-ttggtaggaa 62
||||| ||||||||||||||||||||||||||||| | | |||| || |||||||
Sbjct: 1 ggtgactgccatcagcgaggtatagagttcctacggtaatcgattgaaactttgtaggaa 60
Query: 63 cttcataccgtgctcttggctagccgt 89
||||||||||||||||||| |||||||
Sbjct: 61 cttcataccgtgctcttggatagccgt 87
>35301_aga-mir-276:mirbase
Length = 92
Score = 69.9 bits (35), Expect = 3e-13
Identities = 75/87 (86%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 4 ggtgattgccatcagcgaggtatagagttcctacgttgcgtgtgcgaaa-ttggtaggaa 62
||||| ||||||||||||||||||||||||||||| | | |||| || |||||||
Sbjct: 1 ggtgactgccatcagcgaggtatagagttcctacggtaatcgattgaaactttgtaggaa 60
Query: 63 cttcataccgtgctcttggctagccgt 89
||||||||||||||||||| |||||||
Sbjct: 61 cttcataccgtgctcttggatagccgt 87
>36195_der-mir-276a:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 3e-13
Identities = 64/73 (87%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgttgcgtgtgcgaaattggtaggaacttcat 68
|||||||||||||||||||||||||||||||| | | ||| | |||||||||||||
Sbjct: 9 ttgccatcagcgaggtatagagttcctacgttcattat---aaactcgtaggaacttcat 65
Query: 69 accgtgctcttgg 81
|||||||||||||
Sbjct: 66 accgtgctcttgg 78
>36413_dme-mir-276a:mirbase
Length = 98
Score = 69.9 bits (35), Expect = 3e-13
Identities = 64/73 (87%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgttgcgtgtgcgaaattggtaggaacttcat 68
|||||||||||||||||||||||||||||||| | | ||| | |||||||||||||
Sbjct: 9 ttgccatcagcgaggtatagagttcctacgttcattat---aaactcgtaggaacttcat 65
Query: 69 accgtgctcttgg 81
|||||||||||||
Sbjct: 66 accgtgctcttgg 78
>36414_dme-mir-276a:mirbase
Length = 98
Score = 69.9 bits (35), Expect = 3e-13
Identities = 64/73 (87%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgttgcgtgtgcgaaattggtaggaacttcat 68
|||||||||||||||||||||||||||||||| | | ||| | |||||||||||||
Sbjct: 9 ttgccatcagcgaggtatagagttcctacgttcattat---aaactcgtaggaacttcat 65
Query: 69 accgtgctcttgg 81
|||||||||||||
Sbjct: 66 accgtgctcttgg 78
>37155_dse-mir-276a:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 3e-13
Identities = 64/73 (87%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgttgcgtgtgcgaaattggtaggaacttcat 68
|||||||||||||||||||||||||||||||| | | ||| | |||||||||||||
Sbjct: 9 ttgccatcagcgaggtatagagttcctacgttcattat---aaactcgtaggaacttcat 65
Query: 69 accgtgctcttgg 81
|||||||||||||
Sbjct: 66 accgtgctcttgg 78
>37233_dsi-mir-276a:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 3e-13
Identities = 64/73 (87%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgttgcgtgtgcgaaattggtaggaacttcat 68
|||||||||||||||||||||||||||||||| | | ||| | |||||||||||||
Sbjct: 9 ttgccatcagcgaggtatagagttcctacgttcattat---aaactcgtaggaacttcat 65
Query: 69 accgtgctcttgg 81
|||||||||||||
Sbjct: 66 accgtgctcttgg 78
>37524_dya-mir-276a:mirbase
Length = 87
Score = 69.9 bits (35), Expect = 3e-13
Identities = 64/73 (87%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgttgcgtgtgcgaaattggtaggaacttcat 68
|||||||||||||||||||||||||||||||| | | ||| | |||||||||||||
Sbjct: 9 ttgccatcagcgaggtatagagttcctacgttcattat---aaactcgtaggaacttcat 65
Query: 69 accgtgctcttgg 81
|||||||||||||
Sbjct: 66 accgtgctcttgg 78
>36870_dpe-mir-276b:mirbase
Length = 97
Score = 67.9 bits (34), Expect = 1e-12
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgttgcgtgtgcgaaattggtaggaacttcatacc 71
|||||||||||||||||||||||||||| ||| | | ||| | |||||||||| |||||
Sbjct: 17 ccatcagcgaggtatagagttcctacgtgccgtat-ccaaagtcgtaggaacttaatacc 75
Query: 72 gtgctcttgg 81
||||||||||
Sbjct: 76 gtgctcttgg 85
>36949_dps-mir-276b:mirbase
Length = 99
Score = 67.9 bits (34), Expect = 1e-12
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgttgcgtgtgcgaaattggtaggaacttcatacc 71
|||||||||||||||||||||||||||| ||| | | ||| | |||||||||| |||||
Sbjct: 18 ccatcagcgaggtatagagttcctacgtgccgtat-ccaaagtcgtaggaacttaatacc 76
Query: 72 gtgctcttgg 81
||||||||||
Sbjct: 77 gtgctcttgg 86
>36117_dan-mir-276a:mirbase
Length = 87
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgtt 40
||||||||||||||||||||||||||||||||
Sbjct: 8 ttgccatcagcgaggtatagagttcctacgtt 39
>36284_dgr-mir-276a:mirbase
Length = 89
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgtt 40
||||||||||||||||||||||||||||||||
Sbjct: 9 ttgccatcagcgaggtatagagttcctacgtt 40
>36792_dmo-mir-276a:mirbase
Length = 89
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgtt 40
||||||||||||||||||||||||||||||||
Sbjct: 9 ttgccatcagcgaggtatagagttcctacgtt 40
>37369_dvi-mir-276a:mirbase
Length = 89
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgtt 40
||||||||||||||||||||||||||||||||
Sbjct: 9 ttgccatcagcgaggtatagagttcctacgtt 40
>36118_dan-mir-276b:mirbase
Length = 97
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgt 39
|||||||||||||||||||||||||||||||
Sbjct: 13 ttgccatcagcgaggtatagagttcctacgt 43
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 gtaggaacttcataccgtgctcttgg 81
|||||||||| |||||||||||||||
Sbjct: 60 gtaggaacttaataccgtgctcttgg 85
>36196_der-mir-276b:mirbase
Length = 93
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgtt 40
|||||||||||||||||||||||||||||
Sbjct: 16 ccatcagcgaggtatagagttcctacgtt 44
>36415_dme-mir-276b:mirbase
Length = 99
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgtt 40
|||||||||||||||||||||||||||||
Sbjct: 19 ccatcagcgaggtatagagttcctacgtt 47
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 gtaggaacttcataccgtgctcttgg 81
|||||||||| |||||||||||||||
Sbjct: 61 gtaggaacttaataccgtgctcttgg 86
>36416_dme-mir-276b:mirbase
Length = 99
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgtt 40
|||||||||||||||||||||||||||||
Sbjct: 19 ccatcagcgaggtatagagttcctacgtt 47
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 gtaggaacttcataccgtgctcttgg 81
|||||||||| |||||||||||||||
Sbjct: 61 gtaggaacttaataccgtgctcttgg 86
>37156_dse-mir-276b:mirbase
Length = 93
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgtt 40
|||||||||||||||||||||||||||||
Sbjct: 16 ccatcagcgaggtatagagttcctacgtt 44
>37234_dsi-mir-276b:mirbase
Length = 93
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgtt 40
|||||||||||||||||||||||||||||
Sbjct: 16 ccatcagcgaggtatagagttcctacgtt 44
>37525_dya-mir-276b:mirbase
Length = 93
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgtt 40
|||||||||||||||||||||||||||||
Sbjct: 16 ccatcagcgaggtatagagttcctacgtt 44
>35380_ame-mir-276:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 58/66 (87%), Gaps = 4/66 (6%)
Strand = Plus / Plus
Query: 16 cagcgaggtatagagttcctacgttgcgtgtgcgaaattggtaggaacttcataccgtgc 75
|||||||||||||||||||||||| | || | |||| ||||||||||||||||||||
Sbjct: 15 cagcgaggtatagagttcctacgtagtgt-tcagaaa---gtaggaacttcataccgtgc 70
Query: 76 tcttgg 81
||||||
Sbjct: 71 tcttgg 76
>36793_dmo-mir-276b:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgt 39
||||||||||||||||||||||||||||
Sbjct: 16 ccatcagcgaggtatagagttcctacgt 43
>37370_dvi-mir-276b:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgt 39
||||||||||||||||||||||||||||
Sbjct: 16 ccatcagcgaggtatagagttcctacgt 43
>35022_dpu-mir-276:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 52 attggtaggaacttcataccgtgctct 78
|||||||||||||||||||||||||||
Sbjct: 56 attggtaggaacttcataccgtgctct 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttcctacgt 39
|||||||||||||||||||||||
Sbjct: 12 agcgaggtatagagttcctacgt 34
>35076_api-mir-276:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 gtaggaacttcataccgtgctcttgg 81
||||||||||||||||||||||||||
Sbjct: 51 gtaggaacttcataccgtgctcttgg 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttcctacgtt 40
||||||||||||||||||||||||
Sbjct: 8 agcgaggtatagagttcctacgtt 31
>35549_bmo-mir-276:mirbase
Length = 84
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 gtaggaacttcataccgtgctcttgg 81
||||||||||||||||||||||||||
Sbjct: 50 gtaggaacttcataccgtgctcttgg 75
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttcctacgt 39
|||||||||||||||||||||||
Sbjct: 16 agcgaggtatagagttcctacgt 38
>37587_ngi-mir-276:mirbase
Length = 84
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 gtaggaacttcataccgtgctcttgg 81
||||||||||||||||||||||||||
Sbjct: 51 gtaggaacttcataccgtgctcttgg 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cagcgaggtatagagttcctacgt 39
||||||||||||||||||||||||
Sbjct: 15 cagcgaggtatagagttcctacgt 38
>37660_nvi-mir-276:mirbase
Length = 84
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 gtaggaacttcataccgtgctcttgg 81
||||||||||||||||||||||||||
Sbjct: 51 gtaggaacttcataccgtgctcttgg 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cagcgaggtatagagttcctacgt 39
||||||||||||||||||||||||
Sbjct: 15 cagcgaggtatagagttcctacgt 38
>37767_tca-mir-276:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 gtaggaacttcataccgtgctcttgg 81
||||||||||||||||||||||||||
Sbjct: 45 gtaggaacttcataccgtgctcttgg 70
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttcctacgt 39
|||||||||||||||||||||||
Sbjct: 10 agcgaggtatagagttcctacgt 32
>37768_tca-mir-276:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 gtaggaacttcataccgtgctcttgg 81
||||||||||||||||||||||||||
Sbjct: 45 gtaggaacttcataccgtgctcttgg 70
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttcctacgt 39
|||||||||||||||||||||||
Sbjct: 10 agcgaggtatagagttcctacgt 32
>35206_aae-mir-276-2:mirbase
Length = 190
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 taggaacttcataccgtgctcttgg 81
|||||||||||||||||||||||||
Sbjct: 106 taggaacttcataccgtgctcttgg 130
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tcagcgaggtatagagttccta 36
||||||||||||||||||||||
Sbjct: 62 tcagcgaggtatagagttccta 83
>36032_cqu-mir-276-1:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 taggaacttcataccgtgctcttgg 81
|||||||||||||||||||||||||
Sbjct: 66 taggaacttcataccgtgctcttgg 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttccta 36
||||||||||||||||||||
Sbjct: 22 agcgaggtatagagttccta 41
>36034_cqu-mir-276-3:mirbase
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 taggaacttcataccgtgctcttgg 81
|||||||||||||||||||||||||
Sbjct: 66 taggaacttcataccgtgctcttgg 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttccta 36
||||||||||||||||||||
Sbjct: 22 agcgaggtatagagttccta 41
>37618_nlo-mir-276:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 gtaggaacttcataccgtgctcttg 80
|||||||||||||||||||||||||
Sbjct: 51 gtaggaacttcataccgtgctcttg 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cagcgaggtatagagttcctacgt 39
||||||||||||||||||||||||
Sbjct: 15 cagcgaggtatagagttcctacgt 38
>36285_dgr-mir-276b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgt 39
|||| |||||||||||||||||||||||
Sbjct: 16 ccattagcgaggtatagagttcctacgt 43
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 gtaggaacttcataccgtgctcttgg 81
|||||||||| |||||||||||||||
Sbjct: 60 gtaggaacttaataccgtgctcttgg 85
>37449_dwi-mir-276b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgt 39
|||| |||||||||||||||||||||||
Sbjct: 16 ccataagcgaggtatagagttcctacgt 43
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 gtaggaacttcataccgtgctcttgg 81
|||||||||| |||||||||||||||
Sbjct: 60 gtaggaacttaataccgtgctcttgg 85
>37565_lmi-mir-276:mirbase
Length = 58
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttcctacgt 39
|||||||||||||||||||||||
Sbjct: 2 agcgaggtatagagttcctacgt 24
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 gtaggaacttcataccgtgctct 78
|||||||||||||||||||||||
Sbjct: 36 gtaggaacttcataccgtgctct 58
