miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35212_aae-mir-282-2:mirbase
Length = 135
Score = 268 bits (135), Expect = 1e-72
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 1 atcgtcatcgtcatcgtcgcacaggtgtaatctagcctctcctaggctttgtctgttacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcgtcatcgtcatcgtcgcacaggtgtaatctagcctctcctaggctttgtctgttacc 60
Query: 61 ttccttgggaattccactagccagacatagcctgacagaggttaggtgaaatctgaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttccttgggaattccactagccagacatagcctgacagaggttaggtgaaatctgaaaag 120
Query: 121 tcaacggccaacggt 135
|||||||||||||||
Sbjct: 121 tcaacggccaacggt 135
>35306_aga-mir-282:mirbase
Length = 93
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 81 ccagacatagcctgacagaggttaggtgaaatctg 115
|||||||||||||| ||||||||||||||||||||
Sbjct: 54 ccagacatagcctgtcagaggttaggtgaaatctg 88
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 28 taatctagcctctcctaggctttgtctgt 56
||||||||||||| |||||||||||||||
Sbjct: 11 taatctagcctcttctaggctttgtctgt 39
>35387_ame-mir-282:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 33 tagcctctcctaggctttgtctgt 56
||||||||||||||||||||||||
Sbjct: 19 tagcctctcctaggctttgtctgt 42
>36203_der-mir-282:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 aatctagcctctcctaggctttgtctgt 56
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctactaggctttgtctgt 40
>36292_dgr-mir-282:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 aatctagcctctcctaggctttgtctgt 56
|||||||||||| |||||||||||||||
Sbjct: 10 aatctagcctctactaggctttgtctgt 37
>36428_dme-mir-282:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 aatctagcctctcctaggctttgtctgt 56
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctactaggctttgtctgt 40
>36429_dme-mir-282:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 aatctagcctctcctaggctttgtctgt 56
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctactaggctttgtctgt 40
>36800_dmo-mir-282:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 aatctagcctctcctaggctttgtctgt 56
|||||||||||| |||||||||||||||
Sbjct: 11 aatctagcctctactaggctttgtctgt 38
>36877_dpe-mir-282:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 aatctagcctctcctaggctttgtctgt 56
|||||||||||| |||||||||||||||
Sbjct: 10 aatctagcctctactaggctttgtctgt 37
>36957_dps-mir-282:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 aatctagcctctcctaggctttgtctgt 56
|||||||||||| |||||||||||||||
Sbjct: 10 aatctagcctctactaggctttgtctgt 37
>37163_dse-mir-282:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 aatctagcctctcctaggctttgtctgt 56
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctactaggctttgtctgt 40
>37239_dsi-mir-282:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 aatctagcctctcctaggctttgtctgt 56
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctactaggctttgtctgt 40
>37377_dvi-mir-282:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 aatctagcctctcctaggctttgtctgt 56
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctactaggctttgtctgt 40
>37456_dwi-mir-282:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 aatctagcctctcctaggctttgtctgt 56
|||||||||||| |||||||||||||||
Sbjct: 11 aatctagcctctactaggctttgtctgt 38
>37532_dya-mir-282:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 aatctagcctctcctaggctttgtctgt 56
|||||||||||| |||||||||||||||
Sbjct: 10 aatctagcctctactaggctttgtctgt 37
>37621_nlo-mir-282:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 33 tagcctctcctaggctttgtctgt 56
||||||||||||||||||||||||
Sbjct: 6 tagcctctcctaggctttgtctgt 29
>37664_nvi-mir-282:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 33 tagcctctcctaggctttgtctgt 56
||||||||||||||||||||||||
Sbjct: 19 tagcctctcctaggctttgtctgt 42
>37783_tca-mir-282:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 33 tagcctctcctaggctttgtctgt 56
||||||||||||||||||||||||
Sbjct: 9 tagcctctcctaggctttgtctgt 32
>37784_tca-mir-282:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 33 tagcctctcctaggctttgtctgt 56
||||||||||||||||||||||||
Sbjct: 9 tagcctctcctaggctttgtctgt 32
>36125_dan-mir-282:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 30 atctagcctctcctaggctttgtctgt 56
||||||||||| |||||||||||||||
Sbjct: 11 atctagcctctactaggctttgtctgt 37
>35558_bmo-mir-282:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 32 ctagcctctcctaggctttgtctgtt 57
|||||||||||| |||||||||||||
Sbjct: 13 ctagcctctccttggctttgtctgtt 38
