miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>35216_aae-mir-286b-1:mirbase
          Length = 97

 Score =  192 bits (97), Expect = 3e-50
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  aagtcctggggcgattgtcggcttagtcgctgtatcatttcaactgctgtgcagttcttc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  aagtcctggggcgattgtcggcttagtcgctgtatcatttcaactgctgtgcagttcttc 60

                                               
Query: 61 gctagtgactagaccgaacactcgtatcccaggcctt 97
          |||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctagtgactagaccgaacactcgtatcccaggcctt 97




>35215_aae-mir-286a:mirbase
          Length = 97

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 62 ctagtgactagaccgaacactcg 84
          |||||||||||||||||||||||
Sbjct: 59 ctagtgactagaccgaacactcg 81




>35308_aga-mir-286:mirbase
          Length = 96

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 63 tagtgactagaccgaacactcg 84
          ||||||||||||||||||||||
Sbjct: 58 tagtgactagaccgaacactcg 79




>36129_dan-mir-286:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 64 agtgactagaccgaacactcgt 85
          ||||||||||||||||||||||
Sbjct: 67 agtgactagaccgaacactcgt 88




>36207_der-mir-286:mirbase
          Length = 98

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 64 agtgactagaccgaacactcgt 85
          ||||||||||||||||||||||
Sbjct: 62 agtgactagaccgaacactcgt 83




>36296_dgr-mir-286-1:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 64 agtgactagaccgaacactcgt 85
          ||||||||||||||||||||||
Sbjct: 68 agtgactagaccgaacactcgt 89




>36297_dgr-mir-286-2:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 64 agtgactagaccgaacactcgt 85
          ||||||||||||||||||||||
Sbjct: 68 agtgactagaccgaacactcgt 89




>36436_dme-mir-286:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 64 agtgactagaccgaacactcgt 85
          ||||||||||||||||||||||
Sbjct: 63 agtgactagaccgaacactcgt 84




>36437_dme-mir-286:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 64 agtgactagaccgaacactcgt 85
          ||||||||||||||||||||||
Sbjct: 63 agtgactagaccgaacactcgt 84




>36804_dmo-mir-286:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 64 agtgactagaccgaacactcgt 85
          ||||||||||||||||||||||
Sbjct: 67 agtgactagaccgaacactcgt 88




>36880_dpe-mir-286:mirbase
          Length = 96

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 64 agtgactagaccgaacactcgt 85
          ||||||||||||||||||||||
Sbjct: 60 agtgactagaccgaacactcgt 81




>36961_dps-mir-286:mirbase
          Length = 97

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 64 agtgactagaccgaacactcgt 85
          ||||||||||||||||||||||
Sbjct: 60 agtgactagaccgaacactcgt 81




>37167_dse-mir-286:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 64 agtgactagaccgaacactcgt 85
          ||||||||||||||||||||||
Sbjct: 63 agtgactagaccgaacactcgt 84




>37243_dsi-mir-286:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 64 agtgactagaccgaacactcgt 85
          ||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85




>37381_dvi-mir-286:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 64 agtgactagaccgaacactcgt 85
          ||||||||||||||||||||||
Sbjct: 65 agtgactagaccgaacactcgt 86




>37460_dwi-mir-286:mirbase
          Length = 108

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 64 agtgactagaccgaacactcgt 85
          ||||||||||||||||||||||
Sbjct: 74 agtgactagaccgaacactcgt 95




>37536_dya-mir-286:mirbase
          Length = 98

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 64 agtgactagaccgaacactcgt 85
          ||||||||||||||||||||||
Sbjct: 62 agtgactagaccgaacactcgt 83