miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35231_aae-mir-929-1:mirbase
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 tgcctacgactggtccaaattgactctagtagggagtccttgtgtacgagtgactcccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctacgactggtccaaattgactctagtagggagtccttgtgtacgagtgactcccta 60
Query: 61 acggagtcagattgaacccggtaggatg 88
||||||||||||||||||||||||||||
Sbjct: 61 acggagtcagattgaacccggtaggatg 88
>35319_aga-mir-929:mirbase
Length = 89
Score = 95.6 bits (48), Expect = 5e-21
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 17 aaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattgaa 76
||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattgat 75
Query: 77 cccggtag 84
|||||||
Sbjct: 76 tccggtag 83
>36980_dps-mir-929:mirbase
Length = 94
Score = 73.8 bits (37), Expect = 2e-14
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
|||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||
Sbjct: 23 caaattgactctagtagggagtccttttat-tgagcgactccctaacggagtcagattga 81
Query: 76 a 76
|
Sbjct: 82 a 82
>36479_dme-mir-929:mirbase
Length = 88
Score = 65.9 bits (33), Expect = 4e-12
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcct--ttaatgagcgactccctaacggagtcagattga 73
>36480_dme-mir-929:mirbase
Length = 88
Score = 65.9 bits (33), Expect = 4e-12
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||
Sbjct: 16 caaattgactctagtagggagtcct--ttaatgagcgactccctaacggagtcagattga 73
>37264_dsi-mir-929:mirbase
Length = 118
Score = 65.9 bits (33), Expect = 4e-12
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattga 75
||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||
Sbjct: 34 caaattgactctagtagggagtcct--ttaatgagcgactccctaacggagtcagattga 91
>35089_api-mir-929:mirbase
Length = 60
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 aaattgactctagtagggagtcctt 41
|||||||||||||||||||||||||
Sbjct: 1 aaattgactctagtagggagtcctt 25
>35401_ame-mir-929:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtcc 39
||||||||||||||||||||||||
Sbjct: 14 caaattgactctagtagggagtcc 37
>37595_ngi-mir-929:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtcc 39
||||||||||||||||||||||||
Sbjct: 14 caaattgactctagtagggagtcc 37
>37625_nlo-mir-929:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtcc 39
||||||||||||||||||||||||
Sbjct: 14 caaattgactctagtagggagtcc 37
>37673_nvi-mir-929:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtcc 39
||||||||||||||||||||||||
Sbjct: 14 caaattgactctagtagggagtcc 37
>37809_tca-mir-929:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtcc 39
||||||||||||||||||||||||
Sbjct: 23 caaattgactctagtagggagtcc 46
>37810_tca-mir-929:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 caaattgactctagtagggagtcc 39
||||||||||||||||||||||||
Sbjct: 23 caaattgactctagtagggagtcc 46
>35572_bmo-mir-929:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 aaattgactctagtagggagtcc 39
|||||||||||||||||||||||
Sbjct: 5 aaattgactctagtagggagtcc 27
