miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40640_gso-MIR1510b:mirbase
Length = 101
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 2 atggaagtggagggataggtaaaacaactacttctgtaaaagtaattgttatagttagtt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 atggaagtggagggataggtaaaacaactacttctgtaaaagtaattgttatagttagtt 67
Query: 62 gttgttttacctattccaccaattccatctatcc 95
||||||||||||||||||||||||||||||||||
Sbjct: 68 gttgttttacctattccaccaattccatctatcc 101
>40491_gma-MIR1510b:mirbase
Length = 94
Score = 180 bits (91), Expect = 1e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 2 atggaagtggagggataggtaaaacaactacttctgtaaaagtaattgttatagttagtt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atggaagtggagggataggtaaaacaactacttctgtaaaagtaattgttatagttagtt 63
Query: 62 gttgttttacctattccaccaattccatcta 92
|||||||||||||||||||||||||||||||
Sbjct: 64 gttgttttacctattccaccaattccatcta 94
>40639_gso-MIR1510a:mirbase
Length = 101
Score = 131 bits (66), Expect = 1e-31
Identities = 87/94 (92%)
Strand = Plus / Plus
Query: 2 atggaagtggagggataggtaaaacaactacttctgtaaaagtaattgttatagttagtt 61
|||||| |||||||||||||||||||| ||| ||||| |||||||||||||||||||||
Sbjct: 8 atggaactggagggataggtaaaacaatgactgctgtataagtaattgttatagttagtt 67
Query: 62 gttgttttacctattccaccaattccatctatcc 95
|||||||||||||||||||| ||||||| |||||
Sbjct: 68 gttgttttacctattccacccattccatgtatcc 101
>40490_gma-MIR1510a:mirbase
Length = 93
Score = 127 bits (64), Expect = 2e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 2 atggaagtggagggataggtaaaacaactacttctgtaaaagtaattgttatagttagtt 61
|||||| |||||||||||||||||||| ||| ||||| |||||||||||||||||||||
Sbjct: 3 atggaactggagggataggtaaaacaatgactgctgtataagtaattgttatagttagtt 62
Query: 62 gttgttttacctattccaccaattccat 89
|||||||||||||||||||| |||||||
Sbjct: 63 gttgttttacctattccacccattccat 90
>40489_gma-MIR1510a:mirbase
Length = 93
Score = 127 bits (64), Expect = 2e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 2 atggaagtggagggataggtaaaacaactacttctgtaaaagtaattgttatagttagtt 61
|||||| |||||||||||||||||||| ||| ||||| |||||||||||||||||||||
Sbjct: 3 atggaactggagggataggtaaaacaatgactgctgtataagtaattgttatagttagtt 62
Query: 62 gttgttttacctattccaccaattccat 89
|||||||||||||||||||| |||||||
Sbjct: 63 gttgttttacctattccacccattccat 90
>40757_mtr-MIR2089:mirbase
Length = 163
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 66 ttttacctattccaccaattccat 89
||||||||||||||||||||||||
Sbjct: 39 ttttacctattccaccaattccat 62
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 61 tgttgttttacctattccaccaat 84
|||||||||||||||| |||||||
Sbjct: 130 tgttgttttacctattacaccaat 107
