miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35231_aae-mir-929-1:mirbase
Length = 88
Score = 95.6 bits (48), Expect = 5e-21
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattgat 75
||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattgaa 76
Query: 76 tccggtag 83
|||||||
Sbjct: 77 cccggtag 84
>35232_aae-mir-929-2:mirbase
Length = 89
Score = 95.6 bits (48), Expect = 5e-21
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattgat 75
||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtccttgtgtacgagtgactccctaacggagtcagattgaa 76
Query: 76 tccggtag 83
|||||||
Sbjct: 77 cccggtag 84
>36980_dps-mir-929:mirbase
Length = 94
Score = 93.7 bits (47), Expect = 2e-20
Identities = 57/59 (96%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattga 74
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 24 aaattgactctagtagggagtccttttat-tgagcgactccctaacggagtcagattga 81
>36479_dme-mir-929:mirbase
Length = 88
Score = 87.7 bits (44), Expect = 1e-18
Identities = 56/59 (94%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattga 74
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcctttaat--gagcgactccctaacggagtcagattga 73
>36480_dme-mir-929:mirbase
Length = 88
Score = 87.7 bits (44), Expect = 1e-18
Identities = 56/59 (94%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattga 74
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 17 aaattgactctagtagggagtcctttaat--gagcgactccctaacggagtcagattga 73
>37264_dsi-mir-929:mirbase
Length = 118
Score = 87.7 bits (44), Expect = 1e-18
Identities = 56/59 (94%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttttatacgagcgactccctaacggagtcagattga 74
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 35 aaattgactctagtagggagtcctttaat--gagcgactccctaacggagtcagattga 91
>37809_tca-mir-929:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 7e-08
Identities = 54/61 (88%), Gaps = 3/61 (4%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttt--tatacgagcgactccctaacggagtcagattg 73
||||||||||||||||||||||| || | || |||||||||||||||||||||| |||
Sbjct: 24 aaattgactctagtagggagtccgttacttta-tagcgactccctaacggagtcaggttg 82
Query: 74 a 74
|
Sbjct: 83 a 83
>37810_tca-mir-929:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 7e-08
Identities = 54/61 (88%), Gaps = 3/61 (4%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtccttt--tatacgagcgactccctaacggagtcagattg 73
||||||||||||||||||||||| || | || |||||||||||||||||||||| |||
Sbjct: 24 aaattgactctagtagggagtccgttacttta-tagcgactccctaacggagtcaggttg 82
Query: 74 a 74
|
Sbjct: 83 a 83
>35089_api-mir-929:mirbase
Length = 60
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtcctt 40
|||||||||||||||||||||||||
Sbjct: 1 aaattgactctagtagggagtcctt 25
>35572_bmo-mir-929:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 ttaaattgactctagtagggagtcc 38
|||||||||||||||||||||||||
Sbjct: 3 ttaaattgactctagtagggagtcc 27
>35401_ame-mir-929:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtcc 38
|||||||||||||||||||||||
Sbjct: 15 aaattgactctagtagggagtcc 37
>37595_ngi-mir-929:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtcc 38
|||||||||||||||||||||||
Sbjct: 15 aaattgactctagtagggagtcc 37
>37625_nlo-mir-929:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtcc 38
|||||||||||||||||||||||
Sbjct: 15 aaattgactctagtagggagtcc 37
>37673_nvi-mir-929:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 aaattgactctagtagggagtcc 38
|||||||||||||||||||||||
Sbjct: 15 aaattgactctagtagggagtcc 37
