miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35360_ame-mir-79:mirbase
Length = 100
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Minus
Query: 4 tgctagtgctctttgctttggtaatctagctttatgatccttaattaaaatcatagagct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 tgctagtgctctttgctttggtaatctagctttatgatccttaattaaaatcatagagct 41
Query: 64 atattaccaaagtaaaggcaaaagctttg 92
|||||||||||||||||||||||||||||
Sbjct: 40 atattaccaaagtaaaggcaaaagctttg 12
>37699_tca-mir-9b:mirbase
Length = 169
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 16 ttgctttggtaatctagctttatga 40
|||||||||||||||||||||||||
Sbjct: 116 ttgctttggtaatctagctttatga 92
>37700_tca-mir-9b:mirbase
Length = 169
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 16 ttgctttggtaatctagctttatga 40
|||||||||||||||||||||||||
Sbjct: 116 ttgctttggtaatctagctttatga 92
>35186_aae-mir-79:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 76 tgctttggtaatctagctttatga 53
>35284_aga-mir-79:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 79 tgctttggtaatctagctttatga 56
>35520_bmo-mir-9b:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 16 tgctttggtaatctagctttatga 39
>35533_bmo-mir-79:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 79 tgctttggtaatctagctttatga 56
>36016_cqu-mir-79:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 69 tgctttggtaatctagctttatga 46
>36102_dan-mir-79:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 76 tgctttggtaatctagctttatga 53
>36180_der-mir-79:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 77 tgctttggtaatctagctttatga 54
>36268_dgr-mir-79:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 69 tgctttggtaatctagctttatga 46
>36375_dme-mir-79:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 80 tgctttggtaatctagctttatga 57
>36376_dme-mir-79:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 80 tgctttggtaatctagctttatga 57
>36778_dmo-mir-79:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 69 tgctttggtaatctagctttatga 46
>36851_dpe-mir-79:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 70 tgctttggtaatctagctttatga 47
>36927_dps-mir-79:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 75 tgctttggtaatctagctttatga 52
>37140_dse-mir-79:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 77 tgctttggtaatctagctttatga 54
>37354_dvi-mir-79:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 77 tgctttggtaatctagctttatga 54
>37431_dwi-mir-79-1:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 69 tgctttggtaatctagctttatga 46
>37432_dwi-mir-79-2:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 69 tgctttggtaatctagctttatga 46
>37508_dya-mir-79:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 tgctttggtaatctagctttatga 40
||||||||||||||||||||||||
Sbjct: 77 tgctttggtaatctagctttatga 54
>38623_ppc-mir-79:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 18 gctttggtaatctagctttatgatcctt 45
|||||||||| |||||||||||| ||||
Sbjct: 79 gctttggtaacctagctttatgaacctt 52
