miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37559_hme-mir-193:mirbase
          Length = 78

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 74 tactggcctgctaagtcccaag 95
          ||||||||||||||||||||||
Sbjct: 48 tactggcctgctaagtcccaag 69

>35015_dpu-mir-193:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 74 tactggcctgctaagtcccaa 94
          |||||||||||||||||||||
Sbjct: 52 tactggcctgctaagtcccaa 72

>37751_tca-mir-193:mirbase
          Length = 97

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 73 ctactggcctgctaagtcccaagt 96
          ||||||||||| ||||||||||||
Sbjct: 55 ctactggcctgttaagtcccaagt 78

>37752_tca-mir-193:mirbase
          Length = 97

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 73 ctactggcctgctaagtcccaagt 96
          ||||||||||| ||||||||||||
Sbjct: 55 ctactggcctgttaagtcccaagt 78