miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38781_cte-mir-750:mirbase
          Length = 99

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 82  tgccagatctaactcttccagctca 106
           |||||||||||||||||||||||||
Sbjct: 57  tgccagatctaactcttccagctca 81

>34989_isc-mir-750:mirbase
          Length = 101

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 82  tgccagatctaactcttccagctca 106
           |||||||||||||||||||||||||
Sbjct: 59  tgccagatctaactcttccagctca 83

>38890_lgi-mir-750:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 85  cagatctaactcttccagctca 106
           ||||||||||||||||||||||
Sbjct: 61  cagatctaactcttccagctca 82

>37805_tca-mir-750:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 81  ttgccagatctaactcttcca 101
           |||||||||||||||||||||
Sbjct: 51  ttgccagatctaactcttcca 71

>37806_tca-mir-750:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 81  ttgccagatctaactcttcca 101
           |||||||||||||||||||||
Sbjct: 51  ttgccagatctaactcttcca 71