miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37813_tca-mir-965:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 cataagcgtatagctttttccctttgg 76
|||||||||||||||||| ||||||||
Sbjct: 61 cataagcgtatagcttttcccctttgg 87
>37814_tca-mir-965:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 cataagcgtatagctttttccctttgg 76
|||||||||||||||||| ||||||||
Sbjct: 61 cataagcgtatagcttttcccctttgg 87
>35574_bmo-mir-965:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 50 cataagcgtatagctttttccctt 73
|||||||||||||||||| |||||
Sbjct: 61 cataagcgtatagcttttcccctt 84
>36505_dme-mir-965:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 50 cataagcgtatagctttttccctt 73
|||||||||||||||||| |||||
Sbjct: 64 cataagcgtatagcttttcccctt 87
>36506_dme-mir-965:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 50 cataagcgtatagctttttccctt 73
|||||||||||||||||| |||||
Sbjct: 64 cataagcgtatagcttttcccctt 87
>36986_dps-mir-965:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 50 cataagcgtatagctttttccctt 73
|||||||||||||||||| |||||
Sbjct: 55 cataagcgtatagcttttcccctt 78
>37275_dsi-mir-965:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 50 cataagcgtatagctttttccctt 73
|||||||||||||||||| |||||
Sbjct: 55 cataagcgtatagcttttcccctt 78
>35235_aae-mir-965:mirbase
Length = 79
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 49 ccataagcgtatagctttt 67
|||||||||||||||||||
Sbjct: 49 ccataagcgtatagctttt 67
>35321_aga-mir-965-1:mirbase
Length = 104
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 49 ccataagcgtatagctttt 67
|||||||||||||||||||
Sbjct: 60 ccataagcgtatagctttt 78
>35322_aga-mir-965-2:mirbase
Length = 104
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 49 ccataagcgtatagctttt 67
|||||||||||||||||||
Sbjct: 60 ccataagcgtatagctttt 78
>36051_cqu-mir-965:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 49 ccataagcgtatagctttt 67
|||||||||||||||||||
Sbjct: 55 ccataagcgtatagctttt 73
