miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>36111_dan-mir-210:mirbase
          Length = 86

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 60/66 (90%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          ||||||||||||||||||||||||||||   | || | ||||||||||||||||||||||
Sbjct: 13 gcagctgctggccactgcacaagattag---acttaagactcttgtgcgtgtgacagcgg 69

                
Query: 74 ctattg 79
          ||||||
Sbjct: 70 ctattg 75




>36189_der-mir-210:mirbase
          Length = 86

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 60/66 (90%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          ||||||||||||||||||||||||||||   | || | ||||||||||||||||||||||
Sbjct: 13 gcagctgctggccactgcacaagattag---acttaagactcttgtgcgtgtgacagcgg 69

                
Query: 74 ctattg 79
          ||||||
Sbjct: 70 ctattg 75




>36399_dme-mir-210:mirbase
          Length = 100

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 60/66 (90%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          ||||||||||||||||||||||||||||   | || | ||||||||||||||||||||||
Sbjct: 14 gcagctgctggccactgcacaagattag---acttaagactcttgtgcgtgtgacagcgg 70

                
Query: 74 ctattg 79
          ||||||
Sbjct: 71 ctattg 76




>36400_dme-mir-210:mirbase
          Length = 100

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 60/66 (90%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          ||||||||||||||||||||||||||||   | || | ||||||||||||||||||||||
Sbjct: 14 gcagctgctggccactgcacaagattag---acttaagactcttgtgcgtgtgacagcgg 70

                
Query: 74 ctattg 79
          ||||||
Sbjct: 71 ctattg 76




>36863_dpe-mir-210:mirbase
          Length = 84

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 60/66 (90%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          ||||||||||||||||||||||||||||   | || | ||||||||||||||||||||||
Sbjct: 11 gcagctgctggccactgcacaagattag---atttaagactcttgtgcgtgtgacagcgg 67

                
Query: 74 ctattg 79
          ||||||
Sbjct: 68 ctattg 73




>36940_dps-mir-210a:mirbase
          Length = 94

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 60/66 (90%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          ||||||||||||||||||||||||||||   | || | ||||||||||||||||||||||
Sbjct: 11 gcagctgctggccactgcacaagattag---atttaagactcttgtgcgtgtgacagcgg 67

                
Query: 74 ctattg 79
          ||||||
Sbjct: 68 ctattg 73




>36941_dps-mir-210b:mirbase
          Length = 109

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 60/66 (90%), Gaps = 3/66 (4%)
 Strand = Plus / Minus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          ||||||||||||||||||||||||||||   | || | ||||||||||||||||||||||
Sbjct: 84 gcagctgctggccactgcacaagattag---atttaagactcttgtgcgtgtgacagcgg 28

                
Query: 74 ctattg 79
          ||||||
Sbjct: 27 ctattg 22




>37149_dse-mir-210:mirbase
          Length = 86

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 60/66 (90%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          ||||||||||||||||||||||||||||   | || | ||||||||||||||||||||||
Sbjct: 13 gcagctgctggccactgcacaagattag---acttaagactcttgtgcgtgtgacagcgg 69

                
Query: 74 ctattg 79
          ||||||
Sbjct: 70 ctattg 75




>37227_dsi-mir-210:mirbase
          Length = 86

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 60/66 (90%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          ||||||||||||||||||||||||||||   | || | ||||||||||||||||||||||
Sbjct: 13 gcagctgctggccactgcacaagattag---acttaagactcttgtgcgtgtgacagcgg 69

                
Query: 74 ctattg 79
          ||||||
Sbjct: 70 ctattg 75




>37442_dwi-mir-210:mirbase
          Length = 86

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 60/66 (90%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          ||||||||||||||||||||||||||||   | || | ||||||||||||||||||||||
Sbjct: 13 gcagctgctggccactgcacaagattag---acttaagactcttgtgcgtgtgacagcgg 69

                
Query: 74 ctattg 79
          ||||||
Sbjct: 70 ctattg 75




>37517_dya-mir-210:mirbase
          Length = 86

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 60/66 (90%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          ||||||||||||||||||||||||||||   | || | ||||||||||||||||||||||
Sbjct: 13 gcagctgctggccactgcacaagattag---acttaagactcttgtgcgtgtgacagcgg 69

                
Query: 74 ctattg 79
          ||||||
Sbjct: 70 ctattg 75




>35374_ame-mir-210:mirbase
          Length = 85

 Score = 75.8 bits (38), Expect = 5e-15
 Identities = 58/64 (90%), Gaps = 3/64 (4%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          |||||||||||||||||||||||||||| ||   | | ||||||||||||||||||||||
Sbjct: 12 gcagctgctggccactgcacaagattagaca---taagactcttgtgcgtgtgacagcgg 68

              
Query: 74 ctat 77
          ||||
Sbjct: 69 ctat 72




>37582_ngi-mir-210:mirbase
          Length = 85

 Score = 75.8 bits (38), Expect = 5e-15
 Identities = 58/64 (90%), Gaps = 3/64 (4%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          |||||||||||||||||||||||||||| ||   | | ||||||||||||||||||||||
Sbjct: 12 gcagctgctggccactgcacaagattagaca---taagactcttgtgcgtgtgacagcgg 68

              
Query: 74 ctat 77
          ||||
Sbjct: 69 ctat 72




>37655_nvi-mir-210:mirbase
          Length = 85

 Score = 75.8 bits (38), Expect = 5e-15
 Identities = 58/64 (90%), Gaps = 3/64 (4%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          |||||||||||||||||||||||||||| ||   | | ||||||||||||||||||||||
Sbjct: 12 gcagctgctggccactgcacaagattagaca---taagactcttgtgcgtgtgacagcgg 68

              
Query: 74 ctat 77
          ||||
Sbjct: 69 ctat 72




>36787_dmo-mir-210:mirbase
          Length = 86

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 61/68 (89%), Gaps = 7/68 (10%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattag--tcaagtttatactcttgtgcgtgtgacagc 71
          ||||||||||||||||||||||||||||  |||||     ||||||||||||||||||||
Sbjct: 13 gcagctgctggccactgcacaagattagactcaag-----actcttgtgcgtgtgacagc 67

                  
Query: 72 ggctattg 79
          ||||||||
Sbjct: 68 ggctattg 75




>37363_dvi-mir-210:mirbase
          Length = 84

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 61/68 (89%), Gaps = 7/68 (10%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattag--tcaagtttatactcttgtgcgtgtgacagc 71
          ||||||||||||||||||||||||||||  |||||     ||||||||||||||||||||
Sbjct: 11 gcagctgctggccactgcacaagattagactcaag-----actcttgtgcgtgtgacagc 65

                  
Query: 72 ggctattg 79
          ||||||||
Sbjct: 66 ggctattg 73




>36278_dgr-mir-210:mirbase
          Length = 86

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 59/66 (89%), Gaps = 5/66 (7%)
 Strand = Plus / Plus

                                                                      
Query: 16 agctgctggccactgcacaagattag--tcaagtttatactcttgtgcgtgtgacagcgg 73
          ||||||||||||||||||||||||||  ||||    | ||||||||||||||||||||||
Sbjct: 13 agctgctggccactgcacaagattagattcaaa---agactcttgtgcgtgtgacagcgg 69

                
Query: 74 ctattg 79
          ||||||
Sbjct: 70 ctattg 75




>37753_tca-mir-210:mirbase
          Length = 76

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          ||||||||||| | ||||||||||||||  |  ||   ||||||||||||||||||||||
Sbjct: 7  gcagctgctggacgctgcacaagattagatattttagaactcttgtgcgtgtgacagcgg 66

                
Query: 74 ctattg 79
          ||||||
Sbjct: 67 ctattg 72




>37754_tca-mir-210:mirbase
          Length = 76

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttatactcttgtgcgtgtgacagcgg 73
          ||||||||||| | ||||||||||||||  |  ||   ||||||||||||||||||||||
Sbjct: 7  gcagctgctggacgctgcacaagattagatattttagaactcttgtgcgtgtgacagcgg 66

                
Query: 74 ctattg 79
          ||||||
Sbjct: 67 ctattg 72




>35199_aae-mir-210:mirbase
          Length = 68

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 58/67 (86%), Gaps = 6/67 (8%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttat-actcttgtgcgtgtgacagcg 72
          |||||||||| |||||||||||||||     || |||| |||||||||||||||||| ||
Sbjct: 7  gcagctgctgaccactgcacaagatt-----agattatgactcttgtgcgtgtgacaacg 61

                 
Query: 73 gctattg 79
          |||||||
Sbjct: 62 gctattg 68




>36028_cqu-mir-210:mirbase
          Length = 68

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 58/67 (86%), Gaps = 6/67 (8%)
 Strand = Plus / Plus

                                                                      
Query: 14 gcagctgctggccactgcacaagattagtcaagtttat-actcttgtgcgtgtgacagcg 72
          |||||||||| |||||||||||||||     || |||| |||||||||||||||||| ||
Sbjct: 7  gcagctgctgaccactgcacaagatt-----agattatgactcttgtgcgtgtgacaacg 61

                 
Query: 73 gctattg 79
          |||||||
Sbjct: 62 gctattg 68




>37564_lmi-mir-210:mirbase
          Length = 62

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 52 actcttgtgcgtgtgacagcggctat 77
          ||||||||||||||||||||||||||
Sbjct: 37 actcttgtgcgtgtgacagcggctat 62




>35295_aga-mir-210:mirbase
          Length = 80

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 14 gcagctgctggccactgcacaagattag 41
          |||||||||| |||||||||||||||||
Sbjct: 11 gcagctgctgaccactgcacaagattag 38



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 52 actcttgtgcgtgtgacagcggctatt 78
          |||||||||||||||||| ||||||||
Sbjct: 45 actcttgtgcgtgtgacaacggctatt 71




>25831_xtr-mir-210:mirbase
          Length = 91

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 57 tgtgcgtgtgacagcggcta 76
          ||||||||||||||||||||
Sbjct: 57 tgtgcgtgtgacagcggcta 76




>27426_mdo-mir-210:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 57 tgtgcgtgtgacagcggcta 76
          ||||||||||||||||||||
Sbjct: 50 tgtgcgtgtgacagcggcta 69




>34366_dre-mir-210:mirbase
          Length = 73

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 57 tgtgcgtgtgacagcggcta 76
          ||||||||||||||||||||
Sbjct: 49 tgtgcgtgtgacagcggcta 68




>34634_fru-mir-210:mirbase
          Length = 98

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 57 tgtgcgtgtgacagcggcta 76
          ||||||||||||||||||||
Sbjct: 56 tgtgcgtgtgacagcggcta 75




>34782_tni-mir-210:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 57 tgtgcgtgtgacagcggcta 76
          ||||||||||||||||||||
Sbjct: 48 tgtgcgtgtgacagcggcta 67