miRNEST 2.0, an integrative microRNA resource :: BLAST
>37822_tca-mir-993:mirbase
Length = 88
Score = 119 bits (60), Expect = 3e-28
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 1 ggcacattcgtgatctaccctgtagatccgggcttttgtagattaattacatcagaagct 60
||||||| |||||||||||||||||||||||||||||||||| | ||| ||||||||||
Sbjct: 1 ggcacatccgtgatctaccctgtagatccgggcttttgtagaatttttagatcagaagct 60
Query: 61 cgtctctacaggtatctcacggctggaa 88
||||||||||||||||| |||| |||||
Sbjct: 61 cgtctctacaggtatcttacggatggaa 88
>37823_tca-mir-993:mirbase
Length = 88
Score = 119 bits (60), Expect = 3e-28
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 1 ggcacattcgtgatctaccctgtagatccgggcttttgtagattaattacatcagaagct 60
||||||| |||||||||||||||||||||||||||||||||| | ||| ||||||||||
Sbjct: 1 ggcacatccgtgatctaccctgtagatccgggcttttgtagaatttttagatcagaagct 60
Query: 61 cgtctctacaggtatctcacggctggaa 88
||||||||||||||||| |||| |||||
Sbjct: 61 cgtctctacaggtatcttacggatggaa 88
>35409_ame-mir-993:mirbase
Length = 89
Score = 101 bits (51), Expect = 8e-23
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 1 ggcacattcgtgatctaccctgtagatccgggcttttgtag-attaattacatcagaagc 59
||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 1 ggcacattcgtgatctaccctgtagatccgggcttttgtagaattgtaaatatcagaagc 60
Query: 60 tcgtctctacaggtatctcacgg 82
|||||||||||||||||| ||||
Sbjct: 61 tcgtctctacaggtatcttacgg 83
>37675_nvi-mir-993:mirbase
Length = 119
Score = 101 bits (51), Expect = 8e-23
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 1 ggcacattcgtgatctaccctgtagatccgggcttttgtag-attaattacatcagaagc 59
||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 30 ggcacattcgtgatctaccctgtagatccgggcttttgtagaattgtagatatcagaagc 89
Query: 60 tcgtctctacaggtatctcacgg 82
|||||||||||||||||| ||||
Sbjct: 90 tcgtctctacaggtatcttacgg 112
>37627_nlo-mir-993:mirbase
Length = 89
Score = 91.7 bits (46), Expect = 8e-20
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 5 cattcgtgatctaccctgtagatccgggcttttgtagattaat-tacatcagaagctcgt 63
|||| ||||||||||||||||||||||||||||||||| || | | |||||||||||||
Sbjct: 5 cattggtgatctaccctgtagatccgggcttttgtagaatagtagatatcagaagctcgt 64
Query: 64 ctctacaggtatct 77
||||||||||||||
Sbjct: 65 ctctacaggtatct 78
>35579_bmo-mir-993b:mirbase
Length = 119
Score = 85.7 bits (43), Expect = 5e-18
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 1 ggcacattcgtgatctaccctgtagatccgggcttttgtagattaattacatcagaagct 60
|||||||||||||||||||||||||||||||||||| ||| | || | ||| |||||
Sbjct: 1 ggcacattcgtgatctaccctgtagatccgggctttcgtaaa--aaacaaatcgaaagct 58
Query: 61 cgtctctacaggtatctcacggctgg 86
||||||||||||||| ||||||||||
Sbjct: 59 cgtctctacaggtatatcacggctgg 84
>35094_api-mir-993:mirbase
Length = 88
Score = 83.8 bits (42), Expect = 2e-17
Identities = 75/84 (89%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 9 cgtgatctaccctgtagatccgggcttttgtagattaat---ta-catcagaagctcgtc 64
|||||||||||||||||||||||||||||||||| |||| || |||||||||||||
Sbjct: 5 cgtgatctaccctgtagatccgggcttttgtagaataatcgatatgttcagaagctcgtc 64
Query: 65 tctacaggtatctcacggctggaa 88
||||||||||||| |||| |||||
Sbjct: 65 tctacaggtatcttacggatggaa 88
>37597_ngi-mir-993:mirbase
Length = 85
Score = 77.8 bits (39), Expect = 1e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 8 tcgtgatctaccctgtagatccgggcttttgtagattaattacatcagaagctcgtctct 67
|||||||||||||||||||||||||| |||||||| | | |||||||||||||||||
Sbjct: 6 tcgtgatctaccctgtagatccgggc-tttgtagaatgtagatatcagaagctcgtctct 64
Query: 68 acaggtatctcacgg 82
|||||||||| ||||
Sbjct: 65 acaggtatcttacgg 79
>36563_dme-mir-993:mirbase
Length = 119
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 51 atcagaagctcgtctctacaggtatctcac 80
||||||||||||||||||||||||||||||
Sbjct: 81 atcagaagctcgtctctacaggtatctcac 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 9 cgtgatctaccctgtagatccgggcttttgt 39
||||| ||||||||||| |||||||||||||
Sbjct: 9 cgtgacctaccctgtagttccgggcttttgt 39
>36564_dme-mir-993:mirbase
Length = 119
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 51 atcagaagctcgtctctacaggtatctcac 80
||||||||||||||||||||||||||||||
Sbjct: 81 atcagaagctcgtctctacaggtatctcac 110
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 9 cgtgatctaccctgtagatccgggcttttgt 39
||||| ||||||||||| |||||||||||||
Sbjct: 9 cgtgacctaccctgtagttccgggcttttgt 39
>36997_dps-mir-993:mirbase
Length = 114
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 51 atcagaagctcgtctctacaggtatctcac 80
||||||||||||||||||||||||||||||
Sbjct: 77 atcagaagctcgtctctacaggtatctcac 106
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 9 cgtgatctaccctgtagatccgggcttttgt 39
||||| ||||||||||| |||||||||||||
Sbjct: 5 cgtgacctaccctgtagttccgggcttttgt 35
>37298_dsi-mir-993:mirbase
Length = 114
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 51 atcagaagctcgtctctacaggtatctcac 80
||||||||||||||||||||||||||||||
Sbjct: 77 atcagaagctcgtctctacaggtatctcac 106
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 9 cgtgatctaccctgtagatccgggcttttgt 39
||||| ||||||||||| |||||||||||||
Sbjct: 5 cgtgacctaccctgtagttccgggcttttgt 35
>34990_isc-mir-993:mirbase
Length = 92
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 7 ttcgtgatctaccctgtagatccgggcttttgtaga 42
||||| |||||||||||||| |||||||||||||||
Sbjct: 10 ttcgtaatctaccctgtagaaccgggcttttgtaga 45
>35037_dpu-mir-993:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 51 atcagaagctcgtctctacaggtatctcacgg 82
||||||||||||| ||||||||||||| ||||
Sbjct: 57 atcagaagctcgtttctacaggtatcttacgg 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 taccctgtagatccgggcttttgt 39
|||||||||| |||||||||||||
Sbjct: 20 taccctgtagctccgggcttttgt 43
>35241_aae-mir-993:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 9 cgtgatctaccctgtagatccgggcttttgt 39
||||| ||||||||||| |||||||||||||
Sbjct: 11 cgtgacctaccctgtagttccgggcttttgt 41
>35327_aga-mir-993:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 9 cgtgatctaccctgtagatccgggcttttgt 39
||||| ||||||||||| |||||||||||||
Sbjct: 11 cgtgacctaccctgtagttccgggcttttgt 41
>36057_cqu-mir-993:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 9 cgtgatctaccctgtagatccgggcttttgt 39
||||| ||||||||||| |||||||||||||
Sbjct: 11 cgtgacctaccctgtagttccgggcttttgt 41
