miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>35178_aae-mir-11:mirbase
          Length = 114

 Score = 71.9 bits (36), Expect = 6e-14
 Identities = 67/76 (88%), Gaps = 1/76 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  gtgccgcgcgagaactccggctgtgacctgtgtgccccgtgttgaacttcacatcacagt 60
          ||||||||||||||||||||||||||||||||| | |  | |  ||  ||||||||||||
Sbjct: 17 gtgccgcgcgagaactccggctgtgacctgtgtacactttatccaa-atcacatcacagt 75

                          
Query: 61 ctgagttcttgcttgg 76
          ||||||||||||||||
Sbjct: 76 ctgagttcttgcttgg 91




>35279_aga-mir-11:mirbase
          Length = 90

 Score = 54.0 bits (27), Expect = 1e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 47 cttcacatcacagtctgagttcttgct 73
          |||||||||||||||||||||||||||
Sbjct: 58 cttcacatcacagtctgagttcttgct 84




>36092_dan-mir-11:mirbase
          Length = 79

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 49 tcacatcacagtctgagttcttgct 73
          |||||||||||||||||||||||||
Sbjct: 49 tcacatcacagtctgagttcttgct 73




>36841_dpe-mir-11:mirbase
          Length = 71

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 50 cacatcacagtctgagttcttgct 73
          ||||||||||||||||||||||||
Sbjct: 43 cacatcacagtctgagttcttgct 66




>36917_dps-mir-11:mirbase
          Length = 71

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 50 cacatcacagtctgagttcttgct 73
          ||||||||||||||||||||||||
Sbjct: 43 cacatcacagtctgagttcttgct 66




>36768_dmo-mir-11:mirbase
          Length = 81

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 52 catcacagtctgagttcttgctt 74
          |||||||||||||||||||||||
Sbjct: 54 catcacagtctgagttcttgctt 76




>37344_dvi-mir-11:mirbase
          Length = 81

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 52 catcacagtctgagttcttgctt 74
          |||||||||||||||||||||||
Sbjct: 54 catcacagtctgagttcttgctt 76




>36170_der-mir-11:mirbase
          Length = 75

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 52 catcacagtctgagttcttgct 73
          ||||||||||||||||||||||
Sbjct: 48 catcacagtctgagttcttgct 69




>36258_dgr-mir-11:mirbase
          Length = 79

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 52 catcacagtctgagttcttgct 73
          ||||||||||||||||||||||
Sbjct: 53 catcacagtctgagttcttgct 74




>36355_dme-mir-11:mirbase
          Length = 75

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 52 catcacagtctgagttcttgct 73
          ||||||||||||||||||||||
Sbjct: 48 catcacagtctgagttcttgct 69




>36356_dme-mir-11:mirbase
          Length = 75

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 52 catcacagtctgagttcttgct 73
          ||||||||||||||||||||||
Sbjct: 48 catcacagtctgagttcttgct 69




>37130_dse-mir-11:mirbase
          Length = 75

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 52 catcacagtctgagttcttgct 73
          ||||||||||||||||||||||
Sbjct: 48 catcacagtctgagttcttgct 69




>37206_dsi-mir-11:mirbase
          Length = 75

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 52 catcacagtctgagttcttgct 73
          ||||||||||||||||||||||
Sbjct: 48 catcacagtctgagttcttgct 69




>37421_dwi-mir-11:mirbase
          Length = 82

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 52 catcacagtctgagttcttgct 73
          ||||||||||||||||||||||
Sbjct: 56 catcacagtctgagttcttgct 77




>37499_dya-mir-11:mirbase
          Length = 75

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 52 catcacagtctgagttcttgct 73
          ||||||||||||||||||||||
Sbjct: 48 catcacagtctgagttcttgct 69