miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36829_dpe-mir-3:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 45 catcactgggcaaagtgtgtctcaggat 72
||||||||||||||||||||||||||||
Sbjct: 46 catcactgggcaaagtgtgtctcaggat 73
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 gatcttgggacgcattttgtgcagttatg 29
|||| ||||| ||||||||||||||||||
Sbjct: 1 gatcctgggatgcattttgtgcagttatg 29
>36905_dps-mir-3:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 45 catcactgggcaaagtgtgtctcaggat 72
||||||||||||||||||||||||||||
Sbjct: 46 catcactgggcaaagtgtgtctcaggat 73
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 gatcttgggacgcattttgtgcagttatg 29
|||| ||||| ||||||||||||||||||
Sbjct: 1 gatcctgggatgcattttgtgcagttatg 29
>36158_der-mir-3:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 45 catcactgggcaaagtgtgtctcaggatc 73
|||||||||||||||||||||||| ||||
Sbjct: 41 catcactgggcaaagtgtgtctcaagatc 69
>36240_dgr-mir-3-1:mirbase
Length = 66
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 ccatcactgggcaaagtgtgtctca 68
|||||||||||||||||||||||||
Sbjct: 40 ccatcactgggcaaagtgtgtctca 64
>36241_dgr-mir-3-2:mirbase
Length = 66
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 ccatcactgggcaaagtgtgtctca 68
|||||||||||||||||||||||||
Sbjct: 40 ccatcactgggcaaagtgtgtctca 64
>36331_dme-mir-3:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 45 catcactgggcaaagtgtgtctcaggatc 73
|||||||||||||||||||||||| ||||
Sbjct: 41 catcactgggcaaagtgtgtctcaagatc 69
>36332_dme-mir-3:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 45 catcactgggcaaagtgtgtctcaggatc 73
|||||||||||||||||||||||| ||||
Sbjct: 41 catcactgggcaaagtgtgtctcaagatc 69
>36756_dmo-mir-3:mirbase
Length = 65
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 ccatcactgggcaaagtgtgtctca 68
|||||||||||||||||||||||||
Sbjct: 39 ccatcactgggcaaagtgtgtctca 63
>37118_dse-mir-3:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 45 catcactgggcaaagtgtgtctcaggatc 73
|||||||||||||||||||||||| ||||
Sbjct: 41 catcactgggcaaagtgtgtctcaagatc 69
>37196_dsi-mir-3:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 45 catcactgggcaaagtgtgtctcaggatc 73
|||||||||||||||||||||||| ||||
Sbjct: 41 catcactgggcaaagtgtgtctcaagatc 69
>37332_dvi-mir-3:mirbase
Length = 65
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 ccatcactgggcaaagtgtgtctca 68
|||||||||||||||||||||||||
Sbjct: 39 ccatcactgggcaaagtgtgtctca 63
>37486_dya-mir-3:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 45 catcactgggcaaagtgtgtctcaggatc 73
|||||||||||||||||||||||| ||||
Sbjct: 41 catcactgggcaaagtgtgtctcaagatc 69
>37407_dwi-mir-3:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 45 catcactgggcaaagtgtgtctca 68
||||||||||||||||||||||||
Sbjct: 51 catcactgggcaaagtgtgtctca 74
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 ttgggacgcattttgtgcagttatg 29
|||||| ||||||||||||||||||
Sbjct: 6 ttgggatgcattttgtgcagttatg 30
