miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36165_der-mir-8:mirbase
Length = 87
Score = 151 bits (76), Expect = 1e-37
Identities = 86/88 (97%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttctgataactctaatact 60
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatccttt-ttataactctaatact 59
Query: 61 gtcaggtaaagatgtcgtccgtgtcctt 88
||||||||||||||||||||||||||||
Sbjct: 60 gtcaggtaaagatgtcgtccgtgtcctt 87
>36345_dme-mir-8:mirbase
Length = 87
Score = 151 bits (76), Expect = 1e-37
Identities = 86/88 (97%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttctgataactctaatact 60
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatccttt-ttataactctaatact 59
Query: 61 gtcaggtaaagatgtcgtccgtgtcctt 88
||||||||||||||||||||||||||||
Sbjct: 60 gtcaggtaaagatgtcgtccgtgtcctt 87
>36346_dme-mir-8:mirbase
Length = 87
Score = 151 bits (76), Expect = 1e-37
Identities = 86/88 (97%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttctgataactctaatact 60
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatccttt-ttataactctaatact 59
Query: 61 gtcaggtaaagatgtcgtccgtgtcctt 88
||||||||||||||||||||||||||||
Sbjct: 60 gtcaggtaaagatgtcgtccgtgtcctt 87
>37203_dsi-mir-8:mirbase
Length = 87
Score = 151 bits (76), Expect = 1e-37
Identities = 86/88 (97%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttctgataactctaatact 60
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatccttt-ttataactctaatact 59
Query: 61 gtcaggtaaagatgtcgtccgtgtcctt 88
||||||||||||||||||||||||||||
Sbjct: 60 gtcaggtaaagatgtcgtccgtgtcctt 87
>37493_dya-mir-8:mirbase
Length = 87
Score = 151 bits (76), Expect = 1e-37
Identities = 86/88 (97%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttctgataactctaatact 60
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatccttt-ttataactctaatact 59
Query: 61 gtcaggtaaagatgtcgtccgtgtcctt 88
||||||||||||||||||||||||||||
Sbjct: 60 gtcaggtaaagatgtcgtccgtgtcctt 87
>36836_dpe-mir-8:mirbase
Length = 87
Score = 143 bits (72), Expect = 2e-35
Identities = 85/88 (96%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttctgataactctaatact 60
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatccttt-agatacctctaatact 59
Query: 61 gtcaggtaaagatgtcgtccgtgtcctt 88
||||||||||||||||||||||||||||
Sbjct: 60 gtcaggtaaagatgtcgtccgtgtcctt 87
>36912_dps-mir-8:mirbase
Length = 87
Score = 143 bits (72), Expect = 2e-35
Identities = 85/88 (96%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttctgataactctaatact 60
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatccttt-agatacctctaatact 59
Query: 61 gtcaggtaaagatgtcgtccgtgtcctt 88
||||||||||||||||||||||||||||
Sbjct: 60 gtcaggtaaagatgtcgtccgtgtcctt 87
>37125_dse-mir-8:mirbase
Length = 87
Score = 143 bits (72), Expect = 2e-35
Identities = 85/88 (96%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcctttctgataactctaatact 60
||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagatccttt-ttaaaactctaatact 59
Query: 61 gtcaggtaaagatgtcgtccgtgtcctt 88
||||||||||||||||||||||||||||
Sbjct: 60 gtcaggtaaagatgtcgtccgtgtcctt 87
>36763_dmo-mir-8:mirbase
Length = 90
Score = 119 bits (60), Expect = 3e-28
Identities = 83/90 (92%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 2 aggacatctgttcacatcttaccgggcagcattagatcc---tttctgataactctaata 58
||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||
Sbjct: 1 aggacatctgttcacatcttaccgggcagcattagattcctgttttaaataactctaata 60
Query: 59 ctgtcaggtaaagatgtcgtccgtgtcctt 88
||||||||||||||||||||||||||||||
Sbjct: 61 ctgtcaggtaaagatgtcgtccgtgtcctt 90
>36253_dgr-mir-8:mirbase
Length = 91
Score = 113 bits (57), Expect = 2e-26
Identities = 83/91 (91%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcct---ttctgataactctaat 57
|||||||||||||||||||||||||||||||||||||| || || |||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
Query: 58 actgtcaggtaaagatgtcgtccgtgtcctt 88
|||||||||||||||||||||||||||||||
Sbjct: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
>37339_dvi-mir-8:mirbase
Length = 91
Score = 113 bits (57), Expect = 2e-26
Identities = 83/91 (91%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatcct---ttctgataactctaat 57
|||||||||||||||||||||||||||||||||||||| || || |||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagattcttgatttaaataattctaat 60
Query: 58 actgtcaggtaaagatgtcgtccgtgtcctt 88
|||||||||||||||||||||||||||||||
Sbjct: 61 actgtcaggtaaagatgtcgtccgtgtcctt 91
>37414_dwi-mir-8:mirbase
Length = 92
Score = 107 bits (54), Expect = 1e-24
Identities = 84/92 (91%), Gaps = 4/92 (4%)
Strand = Plus / Plus
Query: 1 aaggacatctgttcacatcttaccgggcagcattagatccttt-ct---gataactctaa 56
|||||||||||||||||||||||||||||||||||||| | | || |||| ||||||
Sbjct: 1 aaggacatctgttcacatcttaccgggcagcattagattttgtactatagatatctctaa 60
Query: 57 tactgtcaggtaaagatgtcgtccgtgtcctt 88
||||||||||||||||||||||||||||||||
Sbjct: 61 tactgtcaggtaaagatgtcgtccgtgtcctt 92
>36006_cqu-mir-8:mirbase
Length = 77
Score = 85.7 bits (43), Expect = 5e-18
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 8 tctgttcacatcttaccgggcagcattagatcctttct-gataactctaatactgtcagg 66
||||||||||||||||||||||||||||||| ||| | ||| |||||||||||||||
Sbjct: 2 tctgttcacatcttaccgggcagcattagatattttttaaatacttctaatactgtcagg 61
Query: 67 taaagatgtcgtccg 81
|||||||||||||||
Sbjct: 62 taaagatgtcgtccg 76
>35171_aae-mir-8:mirbase
Length = 79
Score = 81.8 bits (41), Expect = 7e-17
Identities = 69/76 (90%), Gaps = 3/76 (3%)
Strand = Plus / Plus
Query: 8 tctgttcacatcttaccgggcagcattagatcctttctg--ataactctaatactgtcag 65
||||||||||||||||||||||||||||||| ||| || ||| ||||||||||||||
Sbjct: 2 tctgttcacatcttaccgggcagcattagat-atttttgaaatacttctaatactgtcag 60
Query: 66 gtaaagatgtcgtccg 81
||||||||||||||||
Sbjct: 61 gtaaagatgtcgtccg 76
>35274_aga-mir-8:mirbase
Length = 86
Score = 81.8 bits (41), Expect = 7e-17
Identities = 68/76 (89%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 8 tctgttcacatcttaccgggcagcattag--atcctttctgataactctaatactgtcag 65
||||||||||||||||||||||||||||| || | || |||| ||||||||||||||
Sbjct: 6 tctgttcacatcttaccgggcagcattagatatgttatcggatatttctaatactgtcag 65
Query: 66 gtaaagatgtcgtccg 81
||||||||||||||||
Sbjct: 66 gtaaagatgtcgtccg 81
>35518_bmo-mir-8:mirbase
Length = 102
Score = 65.9 bits (33), Expect = 4e-12
Identities = 66/73 (90%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 11 gttcacatcttaccgggcagcattaga-tcctttctgataact-ctaatactgtcaggta 68
|||| |||||||||||||||||||||| |||| ||| ||| | ||||||||||||||||
Sbjct: 16 gttcgcatcttaccgggcagcattagagtcctgtct-atattttctaatactgtcaggta 74
Query: 69 aagatgtcgtccg 81
|||||||||||||
Sbjct: 75 aagatgtcgtccg 87
>37602_nlo-mir-8:mirbase
Length = 86
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattagatcctttctgataactctaatactgtcagg 66
||||||| |||||||||||||||||||||||| | ||| |||||||||||||||
Sbjct: 6 atctgtttacatcttaccgggcagcattagattacatttgaattttctaatactgtcagg 65
Query: 67 taaagatgtcgtc 79
|||||||||||||
Sbjct: 66 taaagatgtcgtc 78
>37635_nvi-mir-8:mirbase
Length = 86
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattagatcctttctgataactctaatactgtcagg 66
||||||| |||||||||||||||||||||||| | ||| |||||||||||||||
Sbjct: 6 atctgtttacatcttaccgggcagcattagattacatttgaattttctaatactgtcagg 65
Query: 67 taaagatgtcgtc 79
|||||||||||||
Sbjct: 66 taaagatgtcgtc 78
>35344_ame-mir-8:mirbase
Length = 85
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 7 atctgttcacatcttaccgggcagcattagat 38
||||||||||||||||||||||||||||||||
Sbjct: 6 atctgttcacatcttaccgggcagcattagat 37
>37695_tca-mir-8:mirbase
Length = 73
Score = 63.9 bits (32), Expect = 2e-11
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 9 ctgttcacatcttaccgggcagcattagatcctttctgataactctaatactgtcaggta 68
||||| |||||||||||||||||||||||| | | ||| |||||||||||||||||
Sbjct: 2 ctgttaacatcttaccgggcagcattagattacattttatacttctaatactgtcaggta 61
Query: 69 aagatgtc 76
||||||||
Sbjct: 62 aagatgtc 69
>37696_tca-mir-8:mirbase
Length = 73
Score = 63.9 bits (32), Expect = 2e-11
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 9 ctgttcacatcttaccgggcagcattagatcctttctgataactctaatactgtcaggta 68
||||| |||||||||||||||||||||||| | | ||| |||||||||||||||||
Sbjct: 2 ctgttaacatcttaccgggcagcattagattacattttatacttctaatactgtcaggta 61
Query: 69 aagatgtc 76
||||||||
Sbjct: 62 aagatgtc 69
>34999_dpu-mir-8:mirbase
Length = 98
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 52 tctaatactgtcaggtaaagatgtcgtccgtg 83
||||||||||||||||||||||||| ||||||
Sbjct: 59 tctaatactgtcaggtaaagatgtcctccgtg 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 catcttaccgggcagcattagat 38
|||||||||||||||||||||||
Sbjct: 10 catcttaccgggcagcattagat 32
>38851_lgi-mir-8:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 tctaatactgtcaggtaaagatgtc 76
|||||||||||||||||||||||||
Sbjct: 59 tctaatactgtcaggtaaagatgtc 83
>38728_cte-mir-8:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 tctaatactgtcaggtaaagatgtc 76
|||||||||||||||||||||||||
Sbjct: 58 tctaatactgtcaggtaaagatgtc 82
>34963_isc-mir-8:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 tctaatactgtcaggtaaagatgtc 76
|||||||||||||||||||||||||
Sbjct: 56 tctaatactgtcaggtaaagatgtc 80
>37561_lmi-mir-8:mirbase
Length = 61
Score = 50.1 bits (25), Expect = 3e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 16 catcttaccgggcagcattagatcctttctgataactctaatactgtcaggtaaagatgt 75
||||||||||||||||||||||| |||| | |||||||||||||||||| |||||
Sbjct: 1 catcttaccgggcagcattagattgcgactgagatttctaatactgtcaggtaacgatgt 60
Query: 76 c 76
|
Sbjct: 61 c 61
>35047_api-mir-8:mirbase
Length = 63
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 tctaatactgtcaggtaaagatgtc 76
|||||||||||||||||| ||||||
Sbjct: 39 tctaatactgtcaggtaatgatgtc 63
