miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36841_dpe-mir-11:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 50 cacatcacagtctgagttcttgctgag 76
|||||||||||||||||||||||||||
Sbjct: 43 cacatcacagtctgagttcttgctgag 69
>36917_dps-mir-11:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 50 cacatcacagtctgagttcttgctgag 76
|||||||||||||||||||||||||||
Sbjct: 43 cacatcacagtctgagttcttgctgag 69
>35178_aae-mir-11:mirbase
Length = 114
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 49 tcacatcacagtctgagttcttgct 73
|||||||||||||||||||||||||
Sbjct: 64 tcacatcacagtctgagttcttgct 88
>35279_aga-mir-11:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 49 tcacatcacagtctgagttcttgct 73
|||||||||||||||||||||||||
Sbjct: 60 tcacatcacagtctgagttcttgct 84
>36009_cqu-mir-11:mirbase
Length = 76
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 49 tcacatcacagtctgagttcttgct 73
|||||||||||||||||||||||||
Sbjct: 49 tcacatcacagtctgagttcttgct 73
>36170_der-mir-11:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 catcacagtctgagttcttgctgag 76
|||||||||||||||||||||||||
Sbjct: 48 catcacagtctgagttcttgctgag 72
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 gcacttgccaagaactctctctgtgac 27
|||||||||||||||| ||||||||||
Sbjct: 1 gcacttgccaagaactttctctgtgac 27
>36258_dgr-mir-11:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 catcacagtctgagttcttgctgag 76
|||||||||||||||||||||||||
Sbjct: 53 catcacagtctgagttcttgctgag 77
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 caagaactctctctgtgacttg 30
||||||||||||||||||||||
Sbjct: 8 caagaactctctctgtgacttg 29
>36355_dme-mir-11:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 catcacagtctgagttcttgctgag 76
|||||||||||||||||||||||||
Sbjct: 48 catcacagtctgagttcttgctgag 72
>36356_dme-mir-11:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 catcacagtctgagttcttgctgag 76
|||||||||||||||||||||||||
Sbjct: 48 catcacagtctgagttcttgctgag 72
>37130_dse-mir-11:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 catcacagtctgagttcttgctgag 76
|||||||||||||||||||||||||
Sbjct: 48 catcacagtctgagttcttgctgag 72
>37206_dsi-mir-11:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 catcacagtctgagttcttgctgag 76
|||||||||||||||||||||||||
Sbjct: 48 catcacagtctgagttcttgctgag 72
>37421_dwi-mir-11:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 catcacagtctgagttcttgctgag 76
|||||||||||||||||||||||||
Sbjct: 56 catcacagtctgagttcttgctgag 80
>37499_dya-mir-11:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 catcacagtctgagttcttgctgag 76
|||||||||||||||||||||||||
Sbjct: 48 catcacagtctgagttcttgctgag 72
>36768_dmo-mir-11:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 catcacagtctgagttcttgct 73
||||||||||||||||||||||
Sbjct: 54 catcacagtctgagttcttgct 75
>37344_dvi-mir-11:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 catcacagtctgagttcttgct 73
||||||||||||||||||||||
Sbjct: 54 catcacagtctgagttcttgct 75
