miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36183_der-mir-92b:mirbase
Length = 91
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1 acgtcacctgatgtaggccgtgcccggtgcttatttgttac-ttttggaaatacaaattg 59
||||||||||||||||||||||||| ||||||||||||| | |||| |||||||||||||
Sbjct: 2 acgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaatacaaattg 61
Query: 60 cactagtcccggcctgcagtgagtgtc 86
|||||||||||||||||||||||||||
Sbjct: 62 cactagtcccggcctgcagtgagtgtc 88
>37143_dse-mir-92b:mirbase
Length = 91
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1 acgtcacctgatgtaggccgtgcccggtgcttatttgttac-ttttggaaatacaaattg 59
||||||||||||||||||||||||| ||||||||||||| | |||| |||||||||||||
Sbjct: 2 acgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaatacaaattg 61
Query: 60 cactagtcccggcctgcagtgagtgtc 86
|||||||||||||||||||||||||||
Sbjct: 62 cactagtcccggcctgcagtgagtgtc 88
>37218_dsi-mir-92b:mirbase
Length = 91
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1 acgtcacctgatgtaggccgtgcccggtgcttatttgttac-ttttggaaatacaaattg 59
||||||||||||||||||||||||| ||||||||||||| | |||| |||||||||||||
Sbjct: 2 acgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaatacaaattg 61
Query: 60 cactagtcccggcctgcagtgagtgtc 86
|||||||||||||||||||||||||||
Sbjct: 62 cactagtcccggcctgcagtgagtgtc 88
>37511_dya-mir-92b:mirbase
Length = 91
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1 acgtcacctgatgtaggccgtgcccggtgcttatttgttac-ttttggaaatacaaattg 59
||||||||||||||||||||||||| ||||||||||||| | |||| |||||||||||||
Sbjct: 2 acgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaatacaaattg 61
Query: 60 cactagtcccggcctgcagtgagtgtc 86
|||||||||||||||||||||||||||
Sbjct: 62 cactagtcccggcctgcagtgagtgtc 88
>36381_dme-mir-92b:mirbase
Length = 100
Score = 125 bits (63), Expect = 6e-30
Identities = 82/87 (94%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1 acgtcacctgatgtaggccgtgcccggtgcttatttgttac-ttttggaaatacaaattg 59
||||||||||||||||||||||||| ||||||||||||| | |||| |||||||||||||
Sbjct: 5 acgtcacctgatgtaggccgtgcccagtgcttatttgttgcattttcgaaatacaaattg 64
Query: 60 cactagtcccggcctgcagtgagtgtc 86
|||||||||||||||||| ||||||||
Sbjct: 65 cactagtcccggcctgcaatgagtgtc 91
>36382_dme-mir-92b:mirbase
Length = 100
Score = 125 bits (63), Expect = 6e-30
Identities = 82/87 (94%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1 acgtcacctgatgtaggccgtgcccggtgcttatttgttac-ttttggaaatacaaattg 59
||||||||||||||||||||||||| ||||||||||||| | |||| |||||||||||||
Sbjct: 5 acgtcacctgatgtaggccgtgcccagtgcttatttgttgcattttcgaaatacaaattg 64
Query: 60 cactagtcccggcctgcagtgagtgtc 86
|||||||||||||||||| ||||||||
Sbjct: 65 cactagtcccggcctgcaatgagtgtc 91
>36271_dgr-mir-92b:mirbase
Length = 91
Score = 109 bits (55), Expect = 3e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1 acgtcacctgatgtaggccgtgcccggtgcttatttgttacttt-tggaaatacaaattg 59
||||||||||||||||| |||||| |||||||||||||| | | || ||||||||||||
Sbjct: 2 acgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaattg 61
Query: 60 cactagtcccggcctgcagtgagtgtc 86
|||||||||||||||||||||||||||
Sbjct: 62 cactagtcccggcctgcagtgagtgtc 88
>36854_dpe-mir-92b:mirbase
Length = 91
Score = 109 bits (55), Expect = 3e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1 acgtcacctgatgtaggccgtgcccggtgcttatttgttact-tttggaaatacaaattg 59
||||||||||||||||||||||||| |||||||||||| | |||| ||||||||||||
Sbjct: 2 acgtcacctgatgtaggccgtgcccagtgcttatttgtcgttgtttgaaaatacaaattg 61
Query: 60 cactagtcccggcctgcagtgagtgtc 86
||||||||||||||||||| |||||||
Sbjct: 62 cactagtcccggcctgcagagagtgtc 88
>36930_dps-mir-92b:mirbase
Length = 100
Score = 109 bits (55), Expect = 3e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1 acgtcacctgatgtaggccgtgcccggtgcttatttgttact-tttggaaatacaaattg 59
||||||||||||||||||||||||| |||||||||||| | |||| ||||||||||||
Sbjct: 5 acgtcacctgatgtaggccgtgcccagtgcttatttgtcgttgtttgaaaatacaaattg 64
Query: 60 cactagtcccggcctgcagtgagtgtc 86
||||||||||||||||||| |||||||
Sbjct: 65 cactagtcccggcctgcagagagtgtc 91
>36781_dmo-mir-92b:mirbase
Length = 91
Score = 101 bits (51), Expect = 8e-23
Identities = 79/87 (90%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1 acgtcacctgatgtaggccgtgcccggtgcttatttgttacttttggaaa-tacaaattg 59
||||||||||||||||| |||||| |||||||||||||| | | |||| |||||||||
Sbjct: 2 acgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgcgaaaatacaaattg 61
Query: 60 cactagtcccggcctgcagtgagtgtc 86
|||||||||||||||||||||||||||
Sbjct: 62 cactagtcccggcctgcagtgagtgtc 88
>37357_dvi-mir-92b:mirbase
Length = 91
Score = 93.7 bits (47), Expect = 2e-20
Identities = 78/87 (89%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1 acgtcacctgatgtaggccgtgcccggtgcttatttgttacttttggaaa-tacaaattg 59
||||||||||||||||| |||||| |||||||||||||| | | |||| | |||||||
Sbjct: 2 acgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgcgaaaatccaaattg 61
Query: 60 cactagtcccggcctgcagtgagtgtc 86
|||||||||||||||||||||||||||
Sbjct: 62 cactagtcccggcctgcagtgagtgtc 88
>37436_dwi-mir-92b:mirbase
Length = 91
Score = 93.7 bits (47), Expect = 2e-20
Identities = 78/87 (89%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 1 acgtcacctgatgtaggccgtgcccggtgcttatttgttacttttggaa-atacaaattg 59
||||||| |||||||| ||||||| |||||||||||||| || || || ||||||||||
Sbjct: 2 acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61
Query: 60 cactagtcccggcctgcagtgagtgtc 86
|||||||||||||||||||| ||||||
Sbjct: 62 cactagtcccggcctgcagtaagtgtc 88
>35189_aae-mir-92b:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 caaattgcactagtcccggcctgcag 78
||||||||||| ||||||||||||||
Sbjct: 50 caaattgcacttgtcccggcctgcag 75
>35287_aga-mir-92b:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 caaattgcactagtcccggcctgcag 78
||||||||||| ||||||||||||||
Sbjct: 52 caaattgcacttgtcccggcctgcag 77
>37733_tca-mir-92b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 53 caaattgcactagtcccggcctgca 77
||||||||||| |||||||||||||
Sbjct: 50 caaattgcacttgtcccggcctgca 74
>37734_tca-mir-92b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 53 caaattgcactagtcccggcctgca 77
||||||||||| |||||||||||||
Sbjct: 50 caaattgcacttgtcccggcctgca 74
>38863_lgi-mir-92:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 caaattgcactagtcccggcctgc 76
||||||||||| ||||||||||||
Sbjct: 58 caaattgcacttgtcccggcctgc 81
