miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36272_dgr-mir-100:mirbase
          Length = 82

 Score =  163 bits (82), Expect = 2e-41
 Identities = 82/82 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>36184_der-mir-100:mirbase
          Length = 82

 Score =  155 bits (78), Expect = 6e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>36383_dme-mir-100:mirbase
          Length = 100

 Score =  155 bits (78), Expect = 6e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>36384_dme-mir-100:mirbase
          Length = 100

 Score =  155 bits (78), Expect = 6e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>36782_dmo-mir-100:mirbase
          Length = 82

 Score =  155 bits (78), Expect = 6e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>37144_dse-mir-100:mirbase
          Length = 82

 Score =  155 bits (78), Expect = 6e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>37219_dsi-mir-100:mirbase
          Length = 82

 Score =  155 bits (78), Expect = 6e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>37358_dvi-mir-100:mirbase
          Length = 82

 Score =  155 bits (78), Expect = 6e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>37437_dwi-mir-100:mirbase
          Length = 82

 Score =  155 bits (78), Expect = 6e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>37512_dya-mir-100:mirbase
          Length = 82

 Score =  155 bits (78), Expect = 6e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>36855_dpe-mir-100-1:mirbase
          Length = 82

 Score =  147 bits (74), Expect = 1e-36
 Identities = 80/82 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
          |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaattccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>36856_dpe-mir-100-2:mirbase
          Length = 82

 Score =  147 bits (74), Expect = 1e-36
 Identities = 80/82 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
          |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaattccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>36932_dps-mir-100:mirbase
          Length = 100

 Score =  147 bits (74), Expect = 1e-36
 Identities = 80/82 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  ccattaacagaaacccgtaaatccgaacttgtgctgttttttatctgttacaagaccggc 60
          |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  ccattaacagaaacccgtaattccgaacttgtgctgttttatatctgttacaagaccggc 60

                                
Query: 61 attatgggagtctgtcaatgca 82
          ||||||||||||||||||||||
Sbjct: 61 attatgggagtctgtcaatgca 82




>25755_xtr-mir-100:mirbase
          Length = 76

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 11 aaacccgtaaatccgaacttgtgctgt 37
          ||||||||| |||||||||||||||||
Sbjct: 9  aaacccgtagatccgaacttgtgctgt 35




>35288_aga-mir-100:mirbase
          Length = 92

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 10 gaaacccgtaaatccgaacttgtgctg 36
          |||||||||| ||||||||||||||||
Sbjct: 13 gaaacccgtagatccgaacttgtgctg 39




>31827_mmu-mir-100:mirbase
          Length = 80

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 aaacccgtaaatccgaacttgtgctg 36
          ||||||||| ||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtgctg 37




>32708_rno-mir-100:mirbase
          Length = 80

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 aaacccgtaaatccgaacttgtgctg 36
          ||||||||| ||||||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtgctg 37




>33958_ssc-mir-100:mirbase
          Length = 80

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 11 aaacccgtaaatccgaacttgtgctg 36
          ||||||||| ||||||||||||||||
Sbjct: 15 aaacccgtagatccgaacttgtgctg 40




>26440_tgu-mir-100-1:mirbase
          Length = 111

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 11 aaacccgtaaatccgaacttgtgct 35
          ||||||||| |||||||||||||||
Sbjct: 10 aaacccgtagatccgaacttgtgct 34




>26441_tgu-mir-100-2:mirbase
          Length = 111

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 11 aaacccgtaaatccgaacttgtgct 35
          ||||||||| |||||||||||||||
Sbjct: 10 aaacccgtagatccgaacttgtgct 34




>35190_aae-mir-100:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 aacccgtaaatccgaacttgtgctg 36
          |||||||| ||||||||||||||||
Sbjct: 31 aacccgtagatccgaacttgtgctg 55




>36020_cqu-mir-100:mirbase
          Length = 110

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 aacccgtaaatccgaacttgtgctg 36
          |||||||| ||||||||||||||||
Sbjct: 23 aacccgtagatccgaacttgtgctg 47




>27501_age-mir-100:mirbase
          Length = 80

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 11 aaacccgtaaatccgaacttgtgctgtt 38
          ||||||||| ||||||||||||| ||||
Sbjct: 12 aaacccgtagatccgaacttgtggtgtt 39




>27563_lla-mir-100:mirbase
          Length = 80

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 11 aaacccgtaaatccgaacttgtgctgtt 38
          ||||||||| ||||||||||||| ||||
Sbjct: 12 aaacccgtagatccgaacttgtggtgtt 39




>27610_sla-mir-100:mirbase
          Length = 80

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 11 aaacccgtaaatccgaacttgtgctgtt 38
          ||||||||| ||||||||||||| ||||
Sbjct: 12 aaacccgtagatccgaacttgtggtgtt 39




>38866_lgi-mir-100:mirbase
          Length = 101

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 20 aaacccgtagatccgaacttgtg 42




>24672_bfl-mir-100:mirbase
          Length = 100

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 20 aaacccgtagatccgaacttgtg 42




>25468_pma-mir-100a:mirbase
          Length = 89

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 16 aaacccgtagatccgaacttgtg 38




>25470_pma-mir-100c:mirbase
          Length = 88

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 71 aaacccgtagatccgaacttgtg 49




>25930_gga-mir-100:mirbase
          Length = 80

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>27364_mdo-mir-100:mirbase
          Length = 80

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>27704_mml-mir-100:mirbase
          Length = 80

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>28293_ggo-mir-100:mirbase
          Length = 80

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>28414_hsa-mir-100:mirbase
          Length = 80

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>30080_ppa-mir-100:mirbase
          Length = 80

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>30198_ptr-mir-100:mirbase
          Length = 80

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>30803_ppy-mir-100:mirbase
          Length = 80

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>31471_oan-mir-100:mirbase
          Length = 81

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 13 aaacccgtagatccgaacttgtg 35




>33187_bta-mir-100:mirbase
          Length = 76

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 12 aaacccgtagatccgaacttgtg 34




>34263_dre-mir-100-1:mirbase
          Length = 96

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 23 aaacccgtagatccgaacttgtg 45




>34264_dre-mir-100-2:mirbase
          Length = 75

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 10 aaacccgtagatccgaacttgtg 32




>34579_fru-mir-100:mirbase
          Length = 63

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 4  aaacccgtagatccgaacttgtg 26




>34726_tni-mir-100:mirbase
          Length = 63

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 4  aaacccgtagatccgaacttgtg 26




>34877_sko-mir-100:mirbase
          Length = 101

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 aaacccgtaaatccgaacttgtg 33
          ||||||||| |||||||||||||
Sbjct: 20 aaacccgtagatccgaacttgtg 42




>35537_bmo-mir-100:mirbase
          Length = 142

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 12 aacccgtaaatccgaacttgtgc 34
          |||||||| ||||||||||||||
Sbjct: 21 aacccgtagatccgaacttgtgc 43