miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36199_der-mir-279:mirbase
Length = 93
Score = 137 bits (69), Expect = 1e-33
Identities = 88/92 (95%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgggtgagggtccagtgtttcacattga-tttct--gtatttgtg 57
||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||
Sbjct: 2 tactactgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgtg 61
Query: 58 actagatccacactcattaataacggtagttc 89
||||||||||||||||||||||||||||||||
Sbjct: 62 actagatccacactcattaataacggtagttc 93
>36421_dme-mir-279:mirbase
Length = 100
Score = 137 bits (69), Expect = 1e-33
Identities = 88/92 (95%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgggtgagggtccagtgtttcacattga-tttct--gtatttgtg 57
||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||
Sbjct: 9 tactactgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgtg 68
Query: 58 actagatccacactcattaataacggtagttc 89
||||||||||||||||||||||||||||||||
Sbjct: 69 actagatccacactcattaataacggtagttc 100
>36422_dme-mir-279:mirbase
Length = 100
Score = 137 bits (69), Expect = 1e-33
Identities = 88/92 (95%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgggtgagggtccagtgtttcacattga-tttct--gtatttgtg 57
||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||
Sbjct: 9 tactactgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgtg 68
Query: 58 actagatccacactcattaataacggtagttc 89
||||||||||||||||||||||||||||||||
Sbjct: 69 actagatccacactcattaataacggtagttc 100
>36873_dpe-mir-279:mirbase
Length = 93
Score = 137 bits (69), Expect = 1e-33
Identities = 88/92 (95%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgggtgagggtccagtgtttcacattga-tttct--gtatttgtg 57
||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 2 tactactgtttttagtgagtgagggtccagtgtttcacattgattttcttagtatttgtg 61
Query: 58 actagatccacactcattaataacggtagttc 89
||||||||||||||||||||||||||||||||
Sbjct: 62 actagatccacactcattaataacggtagttc 93
>36953_dps-mir-279:mirbase
Length = 95
Score = 137 bits (69), Expect = 1e-33
Identities = 88/92 (95%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgggtgagggtccagtgtttcacattga-tttct--gtatttgtg 57
||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 4 tactactgtttttagtgagtgagggtccagtgtttcacattgattttcttagtatttgtg 63
Query: 58 actagatccacactcattaataacggtagttc 89
||||||||||||||||||||||||||||||||
Sbjct: 64 actagatccacactcattaataacggtagttc 95
>37528_dya-mir-279:mirbase
Length = 93
Score = 137 bits (69), Expect = 1e-33
Identities = 88/92 (95%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgggtgagggtccagtgtttcacattga-tttct--gtatttgtg 57
|||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||
Sbjct: 2 tactactgtttttagtgggtgagggtccagtgcttcacattgattttcttagtatttgtg 61
Query: 58 actagatccacactcattaataacggtagttc 89
||||||||||||||||||||||||||||||||
Sbjct: 62 actagatccacactcattaataacggtagttc 93
>36288_dgr-mir-279:mirbase
Length = 91
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 4 tactgtttttagtgggtgagggtccagtgtttcacattgatt-tctgtatttgtgactag 62
||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||
Sbjct: 5 tactgtttttagtgggtgagggtccagtgtttcacattgtttatttgtatttgtgactag 64
Query: 63 atccacactcattaataacggtagttc 89
||||||||||||||| |||||||||||
Sbjct: 65 atccacactcattaaaaacggtagttc 91
>37159_dse-mir-279:mirbase
Length = 93
Score = 129 bits (65), Expect = 4e-31
Identities = 87/92 (94%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgggtgagggtccagtgtttcacattgattt-ct--gtatttgtg 57
|||| |||||||||||||||| |||||||||||||||||||||||| || |||||||||
Sbjct: 2 tactgctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgtg 61
Query: 58 actagatccacactcattaataacggtagttc 89
||||||||||||||||||||||||||||||||
Sbjct: 62 actagatccacactcattaataacggtagttc 93
>37237_dsi-mir-279:mirbase
Length = 93
Score = 129 bits (65), Expect = 4e-31
Identities = 87/92 (94%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgggtgagggtccagtgtttcacattgattt-ct--gtatttgtg 57
|||| |||||||||||||||| |||||||||||||||||||||||| || |||||||||
Sbjct: 2 tactgctgtttttagtgggtgggggtccagtgtttcacattgattttcttagtatttgtg 61
Query: 58 actagatccacactcattaataacggtagttc 89
||||||||||||||||||||||||||||||||
Sbjct: 62 actagatccacactcattaataacggtagttc 93
>36796_dmo-mir-279:mirbase
Length = 93
Score = 123 bits (62), Expect = 2e-29
Identities = 85/92 (92%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgggtgagggtccagtgtttcacattgatttct---gtatttgtg 57
||||||||||||||||| |||||||||||||||||||||||| || || |||||||||
Sbjct: 2 tactactgtttttagtgagtgagggtccagtgtttcacattgtttgcttaagtatttgtg 61
Query: 58 actagatccacactcattaataacggtagttc 89
|||||||||||||||||||| |||||||||||
Sbjct: 62 actagatccacactcattaaaaacggtagttc 93
>37452_dwi-mir-279:mirbase
Length = 91
Score = 119 bits (60), Expect = 3e-28
Identities = 84/91 (92%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgggtgagggtccagtgtttcacattgatttct--gtatttgtga 58
||||||||||||||||| ||||||||||||||||||||||| | | | ||||||||||
Sbjct: 1 tactactgtttttagtgagtgagggtccagtgtttcacattaaatatttagtatttgtga 60
Query: 59 ctagatccacactcattaataacggtagttc 89
|||||||||||||||||||||||||||||||
Sbjct: 61 ctagatccacactcattaataacggtagttc 91
>37373_dvi-mir-279:mirbase
Length = 94
Score = 111 bits (56), Expect = 8e-26
Identities = 84/93 (90%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 1 tactactgtttttagtgggtgagggtccagtgtttcacattgatttct----gtatttgt 56
||||||||||||||||| ||||||||||||||||||||||| ||| | ||||||||
Sbjct: 2 tactactgtttttagtgagtgagggtccagtgtttcacattcgttttttcaagtatttgt 61
Query: 57 gactagatccacactcattaataacggtagttc 89
||||||||||||||||||||| |||||||||||
Sbjct: 62 gactagatccacactcattaacaacggtagttc 94
>35304_aga-mir-279:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ttgtgactagatccacactcattaat 78
||||||||||||||||||||||||||
Sbjct: 53 ttgtgactagatccacactcattaat 78
>35383_ame-mir-279:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 ttgtgactagatccacactcattaa 77
|||||||||||||||||||||||||
Sbjct: 64 ttgtgactagatccacactcattaa 88
>35209_aae-mir-279:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tgtgactagatccacactcattaa 77
||||||||||||||||||||||||
Sbjct: 59 tgtgactagatccacactcattaa 82
>36037_cqu-mir-279:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tgtgactagatccacactcattaa 77
||||||||||||||||||||||||
Sbjct: 47 tgtgactagatccacactcattaa 70
>37662_nvi-mir-279:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tgtgactagatccacactcattaa 77
||||||||||||||||||||||||
Sbjct: 65 tgtgactagatccacactcattaa 88
>37771_tca-mir-279a:mirbase
Length = 65
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 gtgactagatccacactcattaa 77
|||||||||||||||||||||||
Sbjct: 42 gtgactagatccacactcattaa 64
>37772_tca-mir-279a:mirbase
Length = 65
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 gtgactagatccacactcattaa 77
|||||||||||||||||||||||
Sbjct: 42 gtgactagatccacactcattaa 64
