miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36426_dme-mir-281-2:mirbase
Length = 92
Score = 174 bits (88), Expect = 7e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaataccgattgtaatact 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaagaccgattgtaatact 60
Query: 61 gtcatggaattgctctctttgtataacattcg 92
||||||||||||||||||||||||||||||||
Sbjct: 61 gtcatggaattgctctctttgtataacattcg 92
>36427_dme-mir-281-2:mirbase
Length = 92
Score = 174 bits (88), Expect = 7e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaataccgattgtaatact 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaagaccgattgtaatact 60
Query: 61 gtcatggaattgctctctttgtataacattcg 92
||||||||||||||||||||||||||||||||
Sbjct: 61 gtcatggaattgctctctttgtataacattcg 92
>37162_dse-mir-281-2:mirbase
Length = 92
Score = 174 bits (88), Expect = 7e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaataccgattgtaatact 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaagaccgattgtaatact 60
Query: 61 gtcatggaattgctctctttgtataacattcg 92
||||||||||||||||||||||||||||||||
Sbjct: 61 gtcatggaattgctctctttgtataacattcg 92
>37531_dya-mir-281-2:mirbase
Length = 92
Score = 159 bits (80), Expect = 4e-40
Identities = 89/92 (96%)
Strand = Plus / Plus
Query: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaataccgattgtaatact 60
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaataccaattgtaatact 60
Query: 61 gtcatggaattgctctctttgtataacattcg 92
|||||||||||||||||||||||||| |||||
Sbjct: 61 gtcatggaattgctctctttgtataatattcg 92
>36291_dgr-mir-281-2:mirbase
Length = 93
Score = 145 bits (73), Expect = 6e-36
Identities = 83/85 (97%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 9 gaaatgaagagagctatccgtcgacagtcaagtta-ataccgattgtaatactgtcatgg 67
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9 gaaatgaagagagctatccgtcgacagtcaagttatataccgattgtaatactgtcatgg 68
Query: 68 aattgctctctttgtataacattcg 92
||||||||||||||||||| |||||
Sbjct: 69 aattgctctctttgtataatattcg 93
>36124_dan-mir-281-2:mirbase
Length = 94
Score = 141 bits (71), Expect = 1e-34
Identities = 89/94 (94%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaatacc--gattgtaata 58
||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaaacacggattgtaata 60
Query: 59 ctgtcatggaattgctctctttgtataacattcg 92
||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgtcatggaattgctctctttgtataacattcg 94
>36876_dpe-mir-281-2:mirbase
Length = 91
Score = 135 bits (68), Expect = 6e-33
Identities = 87/92 (94%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaataccgattgtaatact 60
||||| ||||||| ||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 1 cgaatagtgaaataaagagagctatccgtcgacagtcaagttaat-cagattgtaatact 59
Query: 61 gtcatggaattgctctctttgtataacattcg 92
|||||||||||||||||||||||||| |||||
Sbjct: 60 gtcatggaattgctctctttgtataatattcg 91
>36956_dps-mir-281-2:mirbase
Length = 91
Score = 135 bits (68), Expect = 6e-33
Identities = 87/92 (94%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaataccgattgtaatact 60
||||| ||||||| ||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 1 cgaatagtgaaataaagagagctatccgtcgacagtcaagttaat-cagattgtaatact 59
Query: 61 gtcatggaattgctctctttgtataacattcg 92
|||||||||||||||||||||||||| |||||
Sbjct: 60 gtcatggaattgctctctttgtataatattcg 91
>37376_dvi-mir-281-2:mirbase
Length = 91
Score = 127 bits (64), Expect = 1e-30
Identities = 80/84 (95%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 gaaatgaagagagctatccgtcgacagtcaagttaataccgattgtaatactgtcatgga 68
|||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||
Sbjct: 9 gaaatgaagagagctatccgtcgacagtcaagcta-tacagattgtaatactgtcatgga 67
Query: 69 attgctctctttgtataacattcg 92
|||||||||||||||||| |||||
Sbjct: 68 attgctctctttgtataatattcg 91
>36799_dmo-mir-281-2:mirbase
Length = 93
Score = 121 bits (61), Expect = 9e-29
Identities = 80/85 (94%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 9 gaaatgaagagagctatccgtcgacagtcaagtta-ataccgattgtaatactgtcatgg 67
||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 9 gaaatgaagagagctatccgtcgacagtcaagttatatacatattttaatactgtcatgg 68
Query: 68 aattgctctctttgtataacattcg 92
||||||||||||||||||| |||||
Sbjct: 69 aattgctctctttgtataatattcg 93
>37455_dwi-mir-281-2:mirbase
Length = 97
Score = 101 bits (51), Expect = 8e-23
Identities = 82/89 (92%), Gaps = 5/89 (5%)
Strand = Plus / Plus
Query: 9 gaaatgaagagagctatccgtcgacagtcaagtt-aatac---cga-ttgtaatactgtc 63
||||||||||||||||||||||||||||| |||| ||||| ||| |||||||||||||
Sbjct: 9 gaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgtaatactgtc 68
Query: 64 atggaattgctctctttgtataacattcg 92
||||||||||||||||||||||| |||||
Sbjct: 69 atggaattgctctctttgtataatattcg 97
>37454_dwi-mir-281-1:mirbase
Length = 90
Score = 77.8 bits (39), Expect = 1e-15
Identities = 63/70 (90%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagttaataccgattgtaatactgtcatggaattgct 74
||||||||| ||||||||||||| |||||| ||||| ||| |||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccagttaaa--cgattttaaaactgtcatggaattgct 72
Query: 75 ctctttgtat 84
||||||||||
Sbjct: 73 ctctttgtat 82
>36798_dmo-mir-281-1:mirbase
Length = 88
Score = 73.8 bits (37), Expect = 2e-14
Identities = 62/70 (88%), Gaps = 4/70 (5%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagttaataccgattgtaatactgtcatggaattgct 74
||||||||| ||||||||||||| ||| || |||||||| |||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccagtaaa----gattgtaaaactgtcatggaattgct 70
Query: 75 ctctttgtat 84
||||||||||
Sbjct: 71 ctctttgtat 80
>36875_dpe-mir-281-1:mirbase
Length = 88
Score = 71.9 bits (36), Expect = 8e-14
Identities = 69/78 (88%), Gaps = 4/78 (5%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagttaataccgattgtaatactgtcatggaattgct 74
||||||||| ||||||||||||||| || || ||| |||||||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtcaacgta---ccaatt-taatactgtcatggaattgct 70
Query: 75 ctctttgtataacattcg 92
|||||||||||| |||||
Sbjct: 71 ctctttgtataatattcg 88
>36955_dps-mir-281-1:mirbase
Length = 88
Score = 71.9 bits (36), Expect = 8e-14
Identities = 69/78 (88%), Gaps = 4/78 (5%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagttaataccgattgtaatactgtcatggaattgct 74
||||||||| ||||||||||||||| || || ||| |||||||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtcaacgta---ccaatt-taatactgtcatggaattgct 70
Query: 75 ctctttgtataacattcg 92
|||||||||||| |||||
Sbjct: 71 ctctttgtataatattcg 88
>37375_dvi-mir-281-1:mirbase
Length = 88
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 52 tgtaatactgtcatggaattgctctctttgtat 84
|||||||||||||||||||||||||||||||||
Sbjct: 48 tgtaatactgtcatggaattgctctctttgtat 80
>36290_dgr-mir-281-1:mirbase
Length = 88
Score = 63.9 bits (32), Expect = 2e-11
Identities = 62/70 (88%), Gaps = 4/70 (5%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagttaataccgattgtaatactgtcatggaattgct 74
||||||||| ||||||||||||| ||| ||| ||| |||||||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccagt--ataa--attttaatactgtcatggaattgct 70
Query: 75 ctctttgtat 84
||||||||||
Sbjct: 71 ctctttgtat 80
>36123_dan-mir-281-1:mirbase
Length = 86
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgtataacattcg 92
||||||||||||||||||||||||||||| |||||
Sbjct: 52 actgtcatggaattgctctctttgtataatattcg 86
>36201_der-mir-281-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgtataacattcg 92
||||||||||||||||||||||||||||| |||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>36424_dme-mir-281-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgtataacattcg 92
||||||||||||||||||||||||||||| |||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>36425_dme-mir-281-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgtataacattcg 92
||||||||||||||||||||||||||||| |||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37161_dse-mir-281-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgtataacattcg 92
||||||||||||||||||||||||||||| |||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37238_dsi-mir-281:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgtataacattcg 92
||||||||||||||||||||||||||||| |||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37530_dya-mir-281-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgtataacattcg 92
||||||||||||||||||||||||||||| |||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37781_tca-mir-281:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||||||||||||||||||||||||||
Sbjct: 5 aaatgaagagagctatccgtcgacagt 31
>37782_tca-mir-281:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||||||||||||||||||||||||||
Sbjct: 5 aaatgaagagagctatccgtcgacagt 31
>35557_bmo-mir-281:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 aatgaagagagctatccgtcgacagt 36
||||||||||||||||||||||||||
Sbjct: 7 aatgaagagagctatccgtcgacagt 32
>25355_odi-mir-281:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 aatactgtcatggaattgctctctt 79
|||||||||||||||||||||||||
Sbjct: 61 aatactgtcatggaattgctctctt 85
>35210_aae-mir-281:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 16 aaataaagagagctatccgtcgacagt 42
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctcttt 80
|||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78
>35305_aga-mir-281:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 15 aaataaagagagctatccgtcgacagt 41
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctcttt 80
|||||||||||||||||||||||
Sbjct: 55 actgtcatggaattgctctcttt 77
>36038_cqu-mir-281:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 21 aaataaagagagctatccgtcgacagt 47
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctcttt 80
|||||||||||||||||||||||
Sbjct: 61 actgtcatggaattgctctcttt 83
>38122_bma-mir-281:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctcttt 80
|||||||||||||||||||||||
Sbjct: 51 actgtcatggaattgctctcttt 73
>38884_lgi-mir-281:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 55 aatactgtcatggaattgctctcttt 80
|||||||||||||| |||||||||||
Sbjct: 56 aatactgtcatggagttgctctcttt 81
>35081_api-mir-281:mirbase
Length = 62
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagt 36
||||||||||||||||||||||
Sbjct: 1 aagagagctatccgtcgacagt 22
>35386_ame-mir-281:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgta 83
||||||||||| ||||||||||||||
Sbjct: 59 actgtcatggagttgctctctttgta 84
>37566_lmi-mir-281:mirbase
Length = 58
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagt 36
||||||||||||||||||||||
Sbjct: 1 aagagagctatccgtcgacagt 22
>37589_ngi-mir-281:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgt 82
||||||||||| |||||||||||||
Sbjct: 45 actgtcatggacttgctctctttgt 69
>37620_nlo-mir-281:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgt 82
||||||||||| |||||||||||||
Sbjct: 45 actgtcatggacttgctctctttgt 69
>37663_nvi-mir-281:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgt 82
||||||||||| |||||||||||||
Sbjct: 59 actgtcatggacttgctctctttgt 83
