miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36222_der-mir-311c:mirbase
Length = 80
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 tagatagtttttcggacggtatctgcgtcaatatttccttgttagaatatattgcacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagatagtttttcggacggtatctgcgtcaatatttccttgttagaatatattgcacatt 60
Query: 61 caccggcctgaaaatatcaa 80
|||| |||||||||||||||
Sbjct: 61 caccagcctgaaaatatcaa 80
>37547_dya-mir-311a:mirbase
Length = 80
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 tagatagtttttcggacggtatctgcgtcaatatttccttgttagaatatattgcacatt 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagatagttttgcggacggtatctgcgtcaatatttccttgttagaatatattgcacatt 60
Query: 61 caccggcctgaaaatatcaa 80
||||||||||||||||||||
Sbjct: 61 caccggcctgaaaatatcaa 80
>37178_dse-mir-311:mirbase
Length = 84
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1 tagatagtttttcggacggtatctgcgtcaatatttccttgttagaatatattgcacatt 60
|||||| ||||||||||||||| || |||||| ||| ||| || ||||||||||||||||
Sbjct: 3 tagataatttttcggacggtatatgagtcaatgttttctttttcgaatatattgcacatt 62
Query: 61 caccggcctgaaaatatcaa 80
||||||||||||||||||||
Sbjct: 63 caccggcctgaaaatatcaa 82
>36459_dme-mir-311:mirbase
Length = 84
Score = 89.7 bits (45), Expect = 3e-19
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 8 tttttcggacggtatctgcgtcaatatttccttgttagaatatattgcacattcaccggc 67
||||||||||||||| || || |||||||| || | |||||||||||||||||||||||
Sbjct: 10 tttttcggacggtatatgggttaatatttcatttgtcgaatatattgcacattcaccggc 69
Query: 68 ctgaaaatatcaa 80
|||||||||||||
Sbjct: 70 ctgaaaatatcaa 82
>36460_dme-mir-311:mirbase
Length = 84
Score = 89.7 bits (45), Expect = 3e-19
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 8 tttttcggacggtatctgcgtcaatatttccttgttagaatatattgcacattcaccggc 67
||||||||||||||| || || |||||||| || | |||||||||||||||||||||||
Sbjct: 10 tttttcggacggtatatgggttaatatttcatttgtcgaatatattgcacattcaccggc 69
Query: 68 ctgaaaatatcaa 80
|||||||||||||
Sbjct: 70 ctgaaaatatcaa 82
>37254_dsi-mir-311:mirbase
Length = 86
Score = 79.8 bits (40), Expect = 3e-16
Identities = 67/75 (89%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 8 tttttcggacggtatctgcgtcaatatttccttgtta--gaatatattgcacattcaccg 65
||||||||||||||| || |||||||||| || || |||||||||||||||||||||
Sbjct: 10 tttttcggacggtatatgagtcaatattttttttttttcgaatatattgcacattcaccg 69
Query: 66 gcctgaaaatatcaa 80
|||||||||||||||
Sbjct: 70 gcctgaaaatatcaa 84
