miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36220_der-mir-311b-1:mirbase
Length = 75
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 caattttcggctgtggagtgggctagtactgtgattttaacattgagtattgcacattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caattttcggctgtggagtgggctagtactgtgattttaacattgagtattgcacattcc 60
Query: 61 ccagcctgaaagtgt 75
|||||||||||||||
Sbjct: 61 ccagcctgaaagtgt 75
>37548_dya-mir-311b:mirbase
Length = 79
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 1 caattttcggctgtggagtgggctagtactgtgattttaacattgagtattgcacattcc 60
||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 3 caattttcggctgtggattgggctagtactgtgattttagcattaagtattgcacattcc 62
Query: 61 ccagcctgaaagtgt 75
|||||||||||||||
Sbjct: 63 ccagcctgaaagtgt 77
>36141_dan-mir-311b:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 agtattgcacattccccagcctg 68
|||||||||||||||||||||||
Sbjct: 44 agtattgcacattccccagcctg 66
>36463_dme-mir-313:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 25 agtactgtgattttaacattgagtattgcac 55
|||||||| |||||||||||||||||||||
Sbjct: 23 agtactgtttttttaacattgagtattgcac 53
>36464_dme-mir-313:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 25 agtactgtgattttaacattgagtattgcac 55
|||||||| |||||||||||||||||||||
Sbjct: 23 agtactgtttttttaacattgagtattgcac 53
>36222_der-mir-311c:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 48 tattgcacattccccagcctgaaa 71
|||||||||||| |||||||||||
Sbjct: 50 tattgcacattcaccagcctgaaa 73
