miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36224_der-mir-312-2:mirbase
Length = 69
Score = 109 bits (55), Expect = 2e-25
Identities = 66/69 (95%), Gaps = 3/69 (4%)
Strand = Plus / Plus
Query: 1 gcttcggttcgtaccaggagcaattctgcatttt---taagctagtattgcacttgagac 57
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gcttcggttcgtaccaggagcaattctgcattttttttaagctagtattgcacttgagac 60
Query: 58 ggccggatt 66
|||||||||
Sbjct: 61 ggccggatt 69
>37549_dya-mir-312:mirbase
Length = 67
Score = 93.7 bits (47), Expect = 1e-20
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 gcttcggttcgtaccaggagcaattctgcatttttaa-gctagtattgcacttgagacgg 59
|||||||||||| ||||||||||||||||| | |||| ||||||||||||||||||||||
Sbjct: 1 gcttcggttcgtcccaggagcaattctgcactattaaagctagtattgcacttgagacgg 60
Query: 60 ccggatt 66
|||||||
Sbjct: 61 ccggatt 67
>36461_dme-mir-312:mirbase
Length = 66
Score = 69.9 bits (35), Expect = 2e-13
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 20 gcaattctgcatttttaagctagtattgcacttgagacggccggatt 66
|||||||||||||||| | ||||||||||||||||||||||| ||||
Sbjct: 20 gcaattctgcattttttaactagtattgcacttgagacggcctgatt 66
>36462_dme-mir-312:mirbase
Length = 66
Score = 69.9 bits (35), Expect = 2e-13
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 20 gcaattctgcatttttaagctagtattgcacttgagacggccggatt 66
|||||||||||||||| | ||||||||||||||||||||||| ||||
Sbjct: 20 gcaattctgcattttttaactagtattgcacttgagacggcctgatt 66
>37179_dse-mir-312:mirbase
Length = 66
Score = 69.9 bits (35), Expect = 2e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 20 gcaattctgcatttttaagctagtattgcacttgagacggccg 62
|||||||||||||||||| || |||||||||||||||||||||
Sbjct: 20 gcaattctgcatttttaaacttgtattgcacttgagacggccg 62
>37255_dsi-mir-312:mirbase
Length = 66
Score = 69.9 bits (35), Expect = 2e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 20 gcaattctgcatttttaagctagtattgcacttgagacggccg 62
|||||||||||||||||| || |||||||||||||||||||||
Sbjct: 20 gcaattctgcatttttaaacttgtattgcacttgagacggccg 62
>36142_dan-mir-312:mirbase
Length = 57
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 41 agtattgcacttgagacggcc 61
|||||||||||||||||||||
Sbjct: 37 agtattgcacttgagacggcc 57
