miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37550_dya-mir-314:mirbase
Length = 90
Score = 163 bits (82), Expect = 3e-41
Identities = 88/90 (97%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaagaatcccatgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaaccccatgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37181_dse-mir-314:mirbase
Length = 90
Score = 155 bits (78), Expect = 6e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaagaatcccatgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37257_dsi-mir-314:mirbase
Length = 90
Score = 155 bits (78), Expect = 6e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaagaatcccatgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaagtcccgtgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>36465_dme-mir-314:mirbase
Length = 90
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaagaatcccatgtcggattttgt 60
|||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>36466_dme-mir-314:mirbase
Length = 90
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaagaatcccatgtcggattttgt 60
|||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaacttacctagttgaggaaaactcccatgtcggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>37470_dwi-mir-314:mirbase
Length = 90
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaagaatcccatgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||| ||| | |||| |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaattcaatgttggattttgt 60
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 61 tacctctggtattcgagccaataagttcgg 90
>36143_dan-mir-314:mirbase
Length = 88
Score = 125 bits (63), Expect = 6e-30
Identities = 84/90 (93%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaagaatcccatgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||| |||| | | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaaatc--agtttggattttgt 58
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 59 tacctctggtattcgagccaataagttcgg 88
>36889_dpe-mir-314:mirbase
Length = 89
Score = 123 bits (62), Expect = 2e-29
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaagaatcccatgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||| | ||| | | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaat-ggattttgt 59
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 60 tacctctggtattcgagccaataagttcgg 89
>36973_dps-mir-314:mirbase
Length = 89
Score = 123 bits (62), Expect = 2e-29
Identities = 84/90 (93%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaagaatcccatgtcggattttgt 60
||||||||||||||||||||||||||||||||||||||| | ||| | | |||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaaaactccgaaat-ggattttgt 59
Query: 61 tacctctggtattcgagccaataagttcgg 90
||||||||||||||||||||||||||||||
Sbjct: 60 tacctctggtattcgagccaataagttcgg 89
>37392_dvi-mir-314:mirbase
Length = 91
Score = 79.8 bits (40), Expect = 3e-16
Identities = 82/92 (89%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgaggaa-gaatcccatgtc-ggatttt 58
|||||||||||||||||| |||||||||| ||||||||| |||| | | || |||||||
Sbjct: 1 tcgtaacttgtgtggctt-gaatgtacctggttgaggaacgaattcaacgtttggatttt 59
Query: 59 gttacctctggtattcgagccaataagttcgg 90
||| ||| ||||||||||||||||||||||||
Sbjct: 60 gttgcctttggtattcgagccaataagttcgg 91
>36814_dmo-mir-314:mirbase
Length = 95
Score = 60.0 bits (30), Expect = 3e-10
Identities = 80/95 (84%), Gaps = 5/95 (5%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacctagttgag-gaa----gaatcccatgtcggat 55
||||||||||||||||||||||||||||| || ||| ||| |||| | ||| ||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacctcgtcgagcgaaaagcgaattcattgttggat 60
Query: 56 tttgttacctctggtattcgagccaataagttcgg 90
|||||| | ||||||||||||||||||||||||
Sbjct: 61 tttgttgctcttggtattcgagccaataagttcgg 95
>36308_dgr-mir-314:mirbase
Length = 76
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tcgtaacttgtgtggcttcgaatgtacct 29
|||||||||||||||||||||||||||||
Sbjct: 1 tcgtaacttgtgtggcttcgaatgtacct 29
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 68 ggtattcgagccaataagttcgg 90
|||||||||||||||||||||||
Sbjct: 54 ggtattcgagccaataagttcgg 76
