miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36240_dgr-mir-3-1:mirbase
Length = 66
Score = 131 bits (66), Expect = 6e-32
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1 tgggatgcattctgtacagtaatgttgactcttgtaaaaccatcactgggcaaagtgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgggatgcattctgtacagtaatgttgactcttgtaaaaccatcactgggcaaagtgtgt 60
Query: 61 ctcaaa 66
||||||
Sbjct: 61 ctcaaa 66
>36756_dmo-mir-3:mirbase
Length = 65
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 ccatcactgggcaaagtgtgtctcaaa 66
|||||||||||||||||||||||||||
Sbjct: 39 ccatcactgggcaaagtgtgtctcaaa 65
>37332_dvi-mir-3:mirbase
Length = 65
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 ccatcactgggcaaagtgtgtctcaaa 66
|||||||||||||||||||||||||||
Sbjct: 39 ccatcactgggcaaagtgtgtctcaaa 65
>36080_dan-mir-3:mirbase
Length = 73
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 ccatcactgggcaaagtgtgtctca 64
|||||||||||||||||||||||||
Sbjct: 44 ccatcactgggcaaagtgtgtctca 68
>36158_der-mir-3:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 41 catcactgggcaaagtgtgtctcaa 65
|||||||||||||||||||||||||
Sbjct: 41 catcactgggcaaagtgtgtctcaa 65
>36331_dme-mir-3:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 41 catcactgggcaaagtgtgtctcaa 65
|||||||||||||||||||||||||
Sbjct: 41 catcactgggcaaagtgtgtctcaa 65
>36332_dme-mir-3:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 41 catcactgggcaaagtgtgtctcaa 65
|||||||||||||||||||||||||
Sbjct: 41 catcactgggcaaagtgtgtctcaa 65
>37118_dse-mir-3:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 41 catcactgggcaaagtgtgtctcaa 65
|||||||||||||||||||||||||
Sbjct: 41 catcactgggcaaagtgtgtctcaa 65
>37196_dsi-mir-3:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 41 catcactgggcaaagtgtgtctcaa 65
|||||||||||||||||||||||||
Sbjct: 41 catcactgggcaaagtgtgtctcaa 65
>37486_dya-mir-3:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 41 catcactgggcaaagtgtgtctcaa 65
|||||||||||||||||||||||||
Sbjct: 41 catcactgggcaaagtgtgtctcaa 65
>36829_dpe-mir-3:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 41 catcactgggcaaagtgtgtctca 64
||||||||||||||||||||||||
Sbjct: 46 catcactgggcaaagtgtgtctca 69
>36905_dps-mir-3:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 41 catcactgggcaaagtgtgtctca 64
||||||||||||||||||||||||
Sbjct: 46 catcactgggcaaagtgtgtctca 69
>37407_dwi-mir-3:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 41 catcactgggcaaagtgtgtctca 64
||||||||||||||||||||||||
Sbjct: 51 catcactgggcaaagtgtgtctca 74
