miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36781_dmo-mir-92b:mirbase
          Length = 91

 Score =  172 bits (87), Expect = 3e-44
 Identities = 90/91 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaatt 60
          |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1  aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgcgaaaatacaaatt 60

                                         
Query: 61 gcactagtcccggcctgcagtgagtgtcgca 91
          |||||||||||||||||||||||||||||||
Sbjct: 61 gcactagtcccggcctgcagtgagtgtcgca 91




>37357_dvi-mir-92b:mirbase
          Length = 91

 Score =  165 bits (83), Expect = 7e-42
 Identities = 89/91 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaatt 60
          |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 1  aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgcgaaaatccaaatt 60

                                         
Query: 61 gcactagtcccggcctgcagtgagtgtcgca 91
          |||||||||||||||||||||||||||||||
Sbjct: 61 gcactagtcccggcctgcagtgagtgtcgca 91




>36854_dpe-mir-92b:mirbase
          Length = 91

 Score =  125 bits (63), Expect = 6e-30
 Identities = 84/91 (92%)
 Strand = Plus / Plus

                                                                      
Query: 1  aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaatt 60
          |||||||||||||||||| ||||||  |||||||||||| ||| | ||||||||||||||
Sbjct: 1  aacgtcacctgatgtaggccgtgcccagtgcttatttgtcgttgtttgaaaatacaaatt 60

                                         
Query: 61 gcactagtcccggcctgcagtgagtgtcgca 91
          |||||||||||||||||||| ||||||||||
Sbjct: 61 gcactagtcccggcctgcagagagtgtcgca 91




>36930_dps-mir-92b:mirbase
          Length = 100

 Score =  125 bits (63), Expect = 6e-30
 Identities = 84/91 (92%)
 Strand = Plus / Plus

                                                                      
Query: 1  aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaatt 60
          |||||||||||||||||| ||||||  |||||||||||| ||| | ||||||||||||||
Sbjct: 4  aacgtcacctgatgtaggccgtgcccagtgcttatttgtcgttgtttgaaaatacaaatt 63

                                         
Query: 61 gcactagtcccggcctgcagtgagtgtcgca 91
          |||||||||||||||||||| ||||||||||
Sbjct: 64 gcactagtcccggcctgcagagagtgtcgca 94




>37436_dwi-mir-92b:mirbase
          Length = 91

 Score =  115 bits (58), Expect = 6e-27
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                      
Query: 2  acgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaattg 61
          ||||||| ||||||||  |||||||||||||||||||||| ||| | || ||||||||||
Sbjct: 2  acgtcacatgatgtagaccgtgcctggtgcttatttgttgctatttaaatatacaaattg 61

                                        
Query: 62 cactagtcccggcctgcagtgagtgtcgca 91
          |||||||||||||||||||| |||||||||
Sbjct: 62 cactagtcccggcctgcagtaagtgtcgca 91




>36105_dan-mir-92b:mirbase
          Length = 88

 Score =  109 bits (55), Expect = 3e-25
 Identities = 80/87 (91%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                      
Query: 2  acgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaattg 61
          ||||||||||||||||| |||||| ||||||||||||||  | | || ||||||||||||
Sbjct: 1  acgtcacctgatgtaggccgtgcccggtgcttatttgttacttt-tggaaatacaaattg 59

                                     
Query: 62 cactagtcccggcctgcagtgagtgtc 88
          |||||||||||||||||||||||||||
Sbjct: 60 cactagtcccggcctgcagtgagtgtc 86




>36183_der-mir-92b:mirbase
          Length = 91

 Score =  109 bits (55), Expect = 3e-25
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                      
Query: 1  aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaatt 60
          |||||||||||||||||| ||||||  ||||||||||||||   | |  |||||||||||
Sbjct: 1  aacgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaatacaaatt 60

                                         
Query: 61 gcactagtcccggcctgcagtgagtgtcgca 91
          |||||||||||||||||||||||||||||||
Sbjct: 61 gcactagtcccggcctgcagtgagtgtcgca 91




>37143_dse-mir-92b:mirbase
          Length = 91

 Score =  109 bits (55), Expect = 3e-25
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                      
Query: 1  aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaatt 60
          |||||||||||||||||| ||||||  ||||||||||||||   | |  |||||||||||
Sbjct: 1  aacgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaatacaaatt 60

                                         
Query: 61 gcactagtcccggcctgcagtgagtgtcgca 91
          |||||||||||||||||||||||||||||||
Sbjct: 61 gcactagtcccggcctgcagtgagtgtcgca 91




>37218_dsi-mir-92b:mirbase
          Length = 91

 Score =  109 bits (55), Expect = 3e-25
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                      
Query: 1  aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaatt 60
          |||||||||||||||||| ||||||  ||||||||||||||   | |  |||||||||||
Sbjct: 1  aacgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaatacaaatt 60

                                         
Query: 61 gcactagtcccggcctgcagtgagtgtcgca 91
          |||||||||||||||||||||||||||||||
Sbjct: 61 gcactagtcccggcctgcagtgagtgtcgca 91




>37511_dya-mir-92b:mirbase
          Length = 91

 Score =  109 bits (55), Expect = 3e-25
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                      
Query: 1  aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaatt 60
          |||||||||||||||||| ||||||  ||||||||||||||   | |  |||||||||||
Sbjct: 1  aacgtcacctgatgtaggccgtgcccagtgcttatttgttgccttttcgaaatacaaatt 60

                                         
Query: 61 gcactagtcccggcctgcagtgagtgtcgca 91
          |||||||||||||||||||||||||||||||
Sbjct: 61 gcactagtcccggcctgcagtgagtgtcgca 91




>36381_dme-mir-92b:mirbase
          Length = 100

 Score =  101 bits (51), Expect = 8e-23
 Identities = 81/91 (89%)
 Strand = Plus / Plus

                                                                      
Query: 1  aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaatt 60
          |||||||||||||||||| ||||||  ||||||||||||||   | |  |||||||||||
Sbjct: 4  aacgtcacctgatgtaggccgtgcccagtgcttatttgttgcattttcgaaatacaaatt 63

                                         
Query: 61 gcactagtcccggcctgcagtgagtgtcgca 91
          ||||||||||||||||||| |||||||||||
Sbjct: 64 gcactagtcccggcctgcaatgagtgtcgca 94




>36382_dme-mir-92b:mirbase
          Length = 100

 Score =  101 bits (51), Expect = 8e-23
 Identities = 81/91 (89%)
 Strand = Plus / Plus

                                                                      
Query: 1  aacgtcacctgatgtaggtcgtgcctggtgcttatttgttgttatgtgaaaatacaaatt 60
          |||||||||||||||||| ||||||  ||||||||||||||   | |  |||||||||||
Sbjct: 4  aacgtcacctgatgtaggccgtgcccagtgcttatttgttgcattttcgaaatacaaatt 63

                                         
Query: 61 gcactagtcccggcctgcagtgagtgtcgca 91
          ||||||||||||||||||| |||||||||||
Sbjct: 64 gcactagtcccggcctgcaatgagtgtcgca 94




>35189_aae-mir-92b:mirbase
          Length = 83

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 55 caaattgcactagtcccggcctgcag 80
          ||||||||||| ||||||||||||||
Sbjct: 50 caaattgcacttgtcccggcctgcag 75




>35287_aga-mir-92b:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 55 caaattgcactagtcccggcctgcag 80
          ||||||||||| ||||||||||||||
Sbjct: 52 caaattgcacttgtcccggcctgcag 77




>37733_tca-mir-92b:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 55 caaattgcactagtcccggcctgca 79
          ||||||||||| |||||||||||||
Sbjct: 50 caaattgcacttgtcccggcctgca 74




>37734_tca-mir-92b:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 55 caaattgcactagtcccggcctgca 79
          ||||||||||| |||||||||||||
Sbjct: 50 caaattgcacttgtcccggcctgca 74




>38863_lgi-mir-92:mirbase
          Length = 100

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 55 caaattgcactagtcccggcctgc 78
          ||||||||||| ||||||||||||
Sbjct: 58 caaattgcacttgtcccggcctgc 81