miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36792_dmo-mir-276a:mirbase
Length = 89
Score = 161 bits (81), Expect = 1e-40
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 1 cctggtttttgccatcagcgaggtatagagttcctacgttaaatttaaatactcatagga 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 1 cctggtttttgccatcagcgaggtatagagttcctacgttcaatttaaatactcgtagga 60
Query: 61 acttcataccgtgctcttggaagaccaaa 89
|||||||||||||||||||||||||||||
Sbjct: 61 acttcataccgtgctcttggaagaccaaa 89
>37369_dvi-mir-276a:mirbase
Length = 89
Score = 153 bits (77), Expect = 2e-38
Identities = 86/89 (96%)
Strand = Plus / Plus
Query: 1 cctggtttttgccatcagcgaggtatagagttcctacgttaaatttaaatactcatagga 60
|||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||
Sbjct: 1 cctggtttttgccatcagcgaggtatagagttcctacgttcaatttatatactcgtagga 60
Query: 61 acttcataccgtgctcttggaagaccaaa 89
|||||||||||||||||||||||||||||
Sbjct: 61 acttcataccgtgctcttggaagaccaaa 89
>36117_dan-mir-276a:mirbase
Length = 87
Score = 129 bits (65), Expect = 4e-31
Identities = 80/85 (94%)
Strand = Plus / Plus
Query: 2 ctggtttttgccatcagcgaggtatagagttcctacgttaaatttaaatactcataggaa 61
||||||||||||||||||||||||||||||||||||||||| ||| | |||| ||||||
Sbjct: 1 ctggtttttgccatcagcgaggtatagagttcctacgttaacattataaactcgtaggaa 60
Query: 62 cttcataccgtgctcttggaagacc 86
|||||||||||||||||||||||||
Sbjct: 61 cttcataccgtgctcttggaagacc 85
>36869_dpe-mir-276a:mirbase
Length = 89
Score = 129 bits (65), Expect = 4e-31
Identities = 83/89 (93%)
Strand = Plus / Plus
Query: 1 cctggtttttgccatcagcgaggtatagagttcctacgttaaatttaaatactcatagga 60
|||||||||||||||||||||||||||||||||||||||| | ||| | |||| |||||
Sbjct: 1 cctggtttttgccatcagcgaggtatagagttcctacgttcatattataaactcgtagga 60
Query: 61 acttcataccgtgctcttggaagaccaaa 89
|||||||||||||||||||||||||||||
Sbjct: 61 acttcataccgtgctcttggaagaccaaa 89
>36948_dps-mir-276a:mirbase
Length = 99
Score = 129 bits (65), Expect = 4e-31
Identities = 83/89 (93%)
Strand = Plus / Plus
Query: 1 cctggtttttgccatcagcgaggtatagagttcctacgttaaatttaaatactcatagga 60
|||||||||||||||||||||||||||||||||||||||| | ||| | |||| |||||
Sbjct: 1 cctggtttttgccatcagcgaggtatagagttcctacgttcatattataaactcgtagga 60
Query: 61 acttcataccgtgctcttggaagaccaaa 89
|||||||||||||||||||||||||||||
Sbjct: 61 acttcataccgtgctcttggaagaccaaa 89
>37448_dwi-mir-276a:mirbase
Length = 89
Score = 129 bits (65), Expect = 4e-31
Identities = 83/89 (93%)
Strand = Plus / Plus
Query: 1 cctggtttttgccatcagcgaggtatagagttcctacgttaaatttaaatactcatagga 60
|||||||||||||||||||||||||||||||||||||||| | || | | |||| |||||
Sbjct: 1 cctggtttttgccatcagcgaggtatagagttcctacgttcatttaataaactcgtagga 60
Query: 61 acttcataccgtgctcttggaagaccaaa 89
|||||||||||||||||||||||||||||
Sbjct: 61 acttcataccgtgctcttggaagaccaaa 89
>36195_der-mir-276a:mirbase
Length = 87
Score = 123 bits (62), Expect = 2e-29
Identities = 83/89 (93%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 1 cctggtttttgccatcagcgaggtatagagttcctacgttaaatttaaatactcatagga 60
|||||||||||||||||||||||||||||||||||||||| | ||| | |||| |||||
Sbjct: 1 cctggtttttgccatcagcgaggtatagagttcctacgttca--ttataaactcgtagga 58
Query: 61 acttcataccgtgctcttggaagaccaaa 89
|||||||||||||||||||||||||||||
Sbjct: 59 acttcataccgtgctcttggaagaccaaa 87
>36413_dme-mir-276a:mirbase
Length = 98
Score = 123 bits (62), Expect = 2e-29
Identities = 83/89 (93%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 1 cctggtttttgccatcagcgaggtatagagttcctacgttaaatttaaatactcatagga 60
|||||||||||||||||||||||||||||||||||||||| | ||| | |||| |||||
Sbjct: 1 cctggtttttgccatcagcgaggtatagagttcctacgttca--ttataaactcgtagga 58
Query: 61 acttcataccgtgctcttggaagaccaaa 89
|||||||||||||||||||||||||||||
Sbjct: 59 acttcataccgtgctcttggaagaccaaa 87
>36414_dme-mir-276a:mirbase
Length = 98
Score = 123 bits (62), Expect = 2e-29
Identities = 83/89 (93%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 1 cctggtttttgccatcagcgaggtatagagttcctacgttaaatttaaatactcatagga 60
|||||||||||||||||||||||||||||||||||||||| | ||| | |||| |||||
Sbjct: 1 cctggtttttgccatcagcgaggtatagagttcctacgttca--ttataaactcgtagga 58
Query: 61 acttcataccgtgctcttggaagaccaaa 89
|||||||||||||||||||||||||||||
Sbjct: 59 acttcataccgtgctcttggaagaccaaa 87
>37155_dse-mir-276a:mirbase
Length = 87
Score = 123 bits (62), Expect = 2e-29
Identities = 83/89 (93%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 1 cctggtttttgccatcagcgaggtatagagttcctacgttaaatttaaatactcatagga 60
|||||||||||||||||||||||||||||||||||||||| | ||| | |||| |||||
Sbjct: 1 cctggtttttgccatcagcgaggtatagagttcctacgttca--ttataaactcgtagga 58
Query: 61 acttcataccgtgctcttggaagaccaaa 89
|||||||||||||||||||||||||||||
Sbjct: 59 acttcataccgtgctcttggaagaccaaa 87
>37233_dsi-mir-276a:mirbase
Length = 87
Score = 123 bits (62), Expect = 2e-29
Identities = 83/89 (93%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 1 cctggtttttgccatcagcgaggtatagagttcctacgttaaatttaaatactcatagga 60
|||||||||||||||||||||||||||||||||||||||| | ||| | |||| |||||
Sbjct: 1 cctggtttttgccatcagcgaggtatagagttcctacgttca--ttataaactcgtagga 58
Query: 61 acttcataccgtgctcttggaagaccaaa 89
|||||||||||||||||||||||||||||
Sbjct: 59 acttcataccgtgctcttggaagaccaaa 87
>37524_dya-mir-276a:mirbase
Length = 87
Score = 123 bits (62), Expect = 2e-29
Identities = 83/89 (93%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 1 cctggtttttgccatcagcgaggtatagagttcctacgttaaatttaaatactcatagga 60
|||||||||||||||||||||||||||||||||||||||| | ||| | |||| |||||
Sbjct: 1 cctggtttttgccatcagcgaggtatagagttcctacgttca--ttataaactcgtagga 58
Query: 61 acttcataccgtgctcttggaagaccaaa 89
|||||||||||||||||||||||||||||
Sbjct: 59 acttcataccgtgctcttggaagaccaaa 87
>36118_dan-mir-276b:mirbase
Length = 97
Score = 77.8 bits (39), Expect = 1e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 8 tttgccatcagcgaggtatagagttcctacgttaaatttaaa-tactcataggaacttca 66
|||||||||||||||||||||||||||||||| | ||||| || || ||||||||| |
Sbjct: 12 tttgccatcagcgaggtatagagttcctacgtgccacttaaactagtcgtaggaacttaa 71
Query: 67 taccgtgctcttgga 81
|||||||||||||||
Sbjct: 72 taccgtgctcttgga 86
>36793_dmo-mir-276b:mirbase
Length = 97
Score = 77.8 bits (39), Expect = 1e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgt-taaatttaaatactcataggaacttcatacc 70
|||||||||||||||||||||||||||| ||||| |||| || ||||||||| |||||
Sbjct: 16 ccatcagcgaggtatagagttcctacgtgcaaattgcaatagtcgtaggaacttaatacc 75
Query: 71 gtgctcttgga 81
|||||||||||
Sbjct: 76 gtgctcttgga 86
>37370_dvi-mir-276b:mirbase
Length = 97
Score = 77.8 bits (39), Expect = 1e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgt-taaatttaaatactcataggaacttcatacc 70
|||||||||||||||||||||||||||| ||||| |||| || ||||||||| |||||
Sbjct: 16 ccatcagcgaggtatagagttcctacgtgcaaattgcaataatcgtaggaacttaatacc 75
Query: 71 gtgctcttgga 81
|||||||||||
Sbjct: 76 gtgctcttgga 86
>36285_dgr-mir-276b:mirbase
Length = 97
Score = 69.9 bits (35), Expect = 3e-13
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgt-taaatttaaatactcataggaacttcatacc 70
|||| ||||||||||||||||||||||| ||||| |||| || ||||||||| |||||
Sbjct: 16 ccattagcgaggtatagagttcctacgtgcaaattgcaataatcgtaggaacttaatacc 75
Query: 71 gtgctcttgga 81
|||||||||||
Sbjct: 76 gtgctcttgga 86
>37449_dwi-mir-276b:mirbase
Length = 97
Score = 69.9 bits (35), Expect = 3e-13
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgt-taaatttaaatactcataggaacttcatacc 70
|||| ||||||||||||||||||||||| ||||| |||| || ||||||||| |||||
Sbjct: 16 ccataagcgaggtatagagttcctacgtgcaaattgcaataatcgtaggaacttaatacc 75
Query: 71 gtgctcttgga 81
|||||||||||
Sbjct: 76 gtgctcttgga 86
>35076_api-mir-276:mirbase
Length = 77
Score = 65.9 bits (33), Expect = 4e-12
Identities = 62/70 (88%), Gaps = 5/70 (7%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttcctacgttaaattta--aat---actcataggaacttcataccg 71
|||||||||||||||||||||||| || ||| ||| |||| ||||||||||||||||
Sbjct: 8 agcgaggtatagagttcctacgttcaaattattaatgttactcgtaggaacttcataccg 67
Query: 72 tgctcttgga 81
||||||||||
Sbjct: 68 tgctcttgga 77
>35205_aae-mir-276-1:mirbase
Length = 91
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgtt 40
||||||||||||||||||||||||||||||||
Sbjct: 9 ttgccatcagcgaggtatagagttcctacgtt 40
>36033_cqu-mir-276-2:mirbase
Length = 107
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 9 ttgccatcagcgaggtatagagttcctacgtt 40
||||||||||||||||||||||||||||||||
Sbjct: 15 ttgccatcagcgaggtatagagttcctacgtt 46
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 taggaacttcataccgtgctcttgg 80
|||||||||||||||||||||||||
Sbjct: 63 taggaacttcataccgtgctcttgg 87
>36196_der-mir-276b:mirbase
Length = 93
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 tttttgccatcagcgaggtatagagttcctacgtt 40
||||| |||||||||||||||||||||||||||||
Sbjct: 10 tttttaccatcagcgaggtatagagttcctacgtt 44
>36415_dme-mir-276b:mirbase
Length = 99
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 tttttgccatcagcgaggtatagagttcctacgtt 40
||||| |||||||||||||||||||||||||||||
Sbjct: 13 tttttaccatcagcgaggtatagagttcctacgtt 47
>36416_dme-mir-276b:mirbase
Length = 99
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 tttttgccatcagcgaggtatagagttcctacgtt 40
||||| |||||||||||||||||||||||||||||
Sbjct: 13 tttttaccatcagcgaggtatagagttcctacgtt 47
>37156_dse-mir-276b:mirbase
Length = 93
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 tttttgccatcagcgaggtatagagttcctacgtt 40
||||| |||||||||||||||||||||||||||||
Sbjct: 10 tttttaccatcagcgaggtatagagttcctacgtt 44
>37234_dsi-mir-276b:mirbase
Length = 93
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 tttttgccatcagcgaggtatagagttcctacgtt 40
||||| |||||||||||||||||||||||||||||
Sbjct: 10 tttttaccatcagcgaggtatagagttcctacgtt 44
>37525_dya-mir-276b:mirbase
Length = 93
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 tttttgccatcagcgaggtatagagttcctacgtt 40
||||| |||||||||||||||||||||||||||||
Sbjct: 10 tttttaccatcagcgaggtatagagttcctacgtt 44
>35300_aga-mir-276:mirbase
Length = 92
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 10 tgccatcagcgaggtatagagttcctacg 38
|||||||||||||||||||||||||||||
Sbjct: 7 tgccatcagcgaggtatagagttcctacg 35
>35301_aga-mir-276:mirbase
Length = 92
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 10 tgccatcagcgaggtatagagttcctacg 38
|||||||||||||||||||||||||||||
Sbjct: 7 tgccatcagcgaggtatagagttcctacg 35
>35206_aae-mir-276-2:mirbase
Length = 190
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 54 cataggaacttcataccgtgctcttgga 81
||||||||||||||||||||||||||||
Sbjct: 104 cataggaacttcataccgtgctcttgga 131
>36032_cqu-mir-276-1:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 54 cataggaacttcataccgtgctcttgga 81
||||||||||||||||||||||||||||
Sbjct: 64 cataggaacttcataccgtgctcttgga 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttccta 36
||||||||||||||||||||
Sbjct: 22 agcgaggtatagagttccta 41
>36034_cqu-mir-276-3:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 54 cataggaacttcataccgtgctcttgga 81
||||||||||||||||||||||||||||
Sbjct: 64 cataggaacttcataccgtgctcttgga 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttccta 36
||||||||||||||||||||
Sbjct: 22 agcgaggtatagagttccta 41
>36870_dpe-mir-276b:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgt 39
||||||||||||||||||||||||||||
Sbjct: 17 ccatcagcgaggtatagagttcctacgt 44
>36949_dps-mir-276b:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 ccatcagcgaggtatagagttcctacgt 39
||||||||||||||||||||||||||||
Sbjct: 18 ccatcagcgaggtatagagttcctacgt 45
>35380_ame-mir-276:mirbase
Length = 84
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 taggaacttcataccgtgctcttgga 81
||||||||||||||||||||||||||
Sbjct: 52 taggaacttcataccgtgctcttgga 77
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cagcgaggtatagagttcctacgt 39
||||||||||||||||||||||||
Sbjct: 15 cagcgaggtatagagttcctacgt 38
>37587_ngi-mir-276:mirbase
Length = 84
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 taggaacttcataccgtgctcttgga 81
||||||||||||||||||||||||||
Sbjct: 52 taggaacttcataccgtgctcttgga 77
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cagcgaggtatagagttcctacgt 39
||||||||||||||||||||||||
Sbjct: 15 cagcgaggtatagagttcctacgt 38
>37660_nvi-mir-276:mirbase
Length = 84
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 taggaacttcataccgtgctcttgga 81
||||||||||||||||||||||||||
Sbjct: 52 taggaacttcataccgtgctcttgga 77
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cagcgaggtatagagttcctacgt 39
||||||||||||||||||||||||
Sbjct: 15 cagcgaggtatagagttcctacgt 38
>37767_tca-mir-276:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 taggaacttcataccgtgctcttgga 81
||||||||||||||||||||||||||
Sbjct: 46 taggaacttcataccgtgctcttgga 71
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttcctacgt 39
|||||||||||||||||||||||
Sbjct: 10 agcgaggtatagagttcctacgt 32
>37768_tca-mir-276:mirbase
Length = 71
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 56 taggaacttcataccgtgctcttgga 81
||||||||||||||||||||||||||
Sbjct: 46 taggaacttcataccgtgctcttgga 71
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttcctacgt 39
|||||||||||||||||||||||
Sbjct: 10 agcgaggtatagagttcctacgt 32
>35549_bmo-mir-276:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 56 taggaacttcataccgtgctcttgg 80
|||||||||||||||||||||||||
Sbjct: 51 taggaacttcataccgtgctcttgg 75
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttcctacgt 39
|||||||||||||||||||||||
Sbjct: 16 agcgaggtatagagttcctacgt 38
>37618_nlo-mir-276:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cagcgaggtatagagttcctacgt 39
||||||||||||||||||||||||
Sbjct: 15 cagcgaggtatagagttcctacgt 38
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 56 taggaacttcataccgtgctcttg 79
||||||||||||||||||||||||
Sbjct: 52 taggaacttcataccgtgctcttg 75
>35022_dpu-mir-276:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttcctacgt 39
|||||||||||||||||||||||
Sbjct: 12 agcgaggtatagagttcctacgt 34
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 taggaacttcataccgtgctct 77
||||||||||||||||||||||
Sbjct: 61 taggaacttcataccgtgctct 82
>37565_lmi-mir-276:mirbase
Length = 58
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 agcgaggtatagagttcctacgt 39
|||||||||||||||||||||||
Sbjct: 2 agcgaggtatagagttcctacgt 24
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 taggaacttcataccgtgctct 77
||||||||||||||||||||||
Sbjct: 37 taggaacttcataccgtgctct 58
