miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37379_dvi-mir-284:mirbase
Length = 98
Score = 174 bits (88), Expect = 8e-45
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaaagggaaggcttgtgcactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
>36802_dmo-mir-284:mirbase
Length = 98
Score = 143 bits (72), Expect = 3e-35
Identities = 90/96 (93%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
||||||||||||||||| ||||||||||||| ||||||||| ||||||||| |||| |||
Sbjct: 1 gttgcagttcctggaataaagttgactgtgtcgcctgtaaggggaaggcttttgcattgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
||||||||||||||||||||||||||||| ||||||
Sbjct: 61 ttacaaagtcagcaacttgattccagcaactgcggc 96
>37458_dwi-mir-284:mirbase
Length = 99
Score = 129 bits (65), Expect = 4e-31
Identities = 90/97 (92%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagagg-aaggcttgtgcactg 59
|||||||||||||||||||||||||||||||||||||| || || |||||||| ||| ||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgttaggggaaaggcttgagcattg 60
Query: 60 cttacaaagtcagcaacttgattccagcaattgcggc 96
| ||| |||||||||||||||||||||||||||||||
Sbjct: 61 catactaagtcagcaacttgattccagcaattgcggc 97
>36127_dan-mir-284:mirbase
Length = 98
Score = 127 bits (64), Expect = 2e-30
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||| || | |||||||| | |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagaactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
|| |||||||||||||||||||||||||||||||
Sbjct: 61 ttcagaagtcagcaacttgattccagcaattgcggc 96
>36205_der-mir-284:mirbase
Length = 98
Score = 127 bits (64), Expect = 2e-30
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||| || | |||||||| | |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagtactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
|| |||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggc 96
>37534_dya-mir-284:mirbase
Length = 98
Score = 127 bits (64), Expect = 2e-30
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||| || | |||||||| | |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgagtactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
|| |||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggc 96
>36879_dpe-mir-284:mirbase
Length = 98
Score = 119 bits (60), Expect = 4e-28
Identities = 87/96 (90%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
||||||||||||||||||||||||||||||||||||| | | |||||||| |||||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
|| |||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggc 96
>36959_dps-mir-284:mirbase
Length = 100
Score = 119 bits (60), Expect = 4e-28
Identities = 87/96 (90%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
||||||||||||||||||||||||||||||||||||| | | |||||||| |||||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgggaaggcaaggcttgagcactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
|| |||||||||||||||||||||||||||||||
Sbjct: 61 ttctgaagtcagcaacttgattccagcaattgcggc 96
>37165_dse-mir-284:mirbase
Length = 98
Score = 111 bits (56), Expect = 9e-26
Identities = 86/96 (89%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||| || | |||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
| |||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggc 96
>37241_dsi-mir-284:mirbase
Length = 98
Score = 111 bits (56), Expect = 9e-26
Identities = 86/96 (89%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||| || | |||||||| |||||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaatactgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
| |||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggc 96
>36432_dme-mir-284:mirbase
Length = 100
Score = 103 bits (52), Expect = 2e-23
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||| || | |||||||| | |||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaataatgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
| |||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggc 96
>36433_dme-mir-284:mirbase
Length = 100
Score = 103 bits (52), Expect = 2e-23
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 1 gttgcagttcctggaattaagttgactgtgtagcctgtaagaggaaggcttgtgcactgc 60
|||||||||||||||||||||||||||||||||||||| || | |||||||| | |||
Sbjct: 1 gttgcagttcctggaattaagttgactgtgtagcctgtgagggcaaggcttgaataatgc 60
Query: 61 ttacaaagtcagcaacttgattccagcaattgcggc 96
| |||||||||||||||||||||||||||||||
Sbjct: 61 tcctgaagtcagcaacttgattccagcaattgcggc 96
