miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36296_dgr-mir-286-1:mirbase
Length = 104
Score = 206 bits (104), Expect = 2e-54
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgcttttgaacctaaactctatatacaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgcttttgaacctaaactctatatacaata 60
Query: 61 tatataaagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatataaagtgactagaccgaacactcgtgctataattttaaaa 104
>36804_dmo-mir-286:mirbase
Length = 103
Score = 99.6 bits (50), Expect = 4e-22
Identities = 93/105 (88%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgcttttg-aacctaaactctatatacaat 59
||||||||||||||||||||||||||||||| ||||| ||| || || | | | || |
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtctctttttcaacatatacaccaaa--catt 58
Query: 60 atatataaagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 ctatataaagtgactagaccgaacactcgtgctataattttaaaa 103
>37381_dvi-mir-286:mirbase
Length = 101
Score = 95.6 bits (48), Expect = 6e-21
Identities = 92/105 (87%), Gaps = 5/105 (4%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgcttttgaacctaaactctatat-acaat 59
||||||||||||||||||||||||||||||||||||| | ||| |||| | ||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttca----aacaatataccattat 56
Query: 60 atatataaagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 ctatataaagtgactagaccgaacactcgtgctataattttaaaa 101
>36129_dan-mir-286:mirbase
Length = 103
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aagtgactagaccgaacactcgtgctataattttaaaa 103
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
|||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ttaaaattgaatggcgattgtcggtatggtcgctttt 37
>36207_der-mir-286:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtgactagaccgaacactcgtgctataattttaaaa 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttt 37
>36436_dme-mir-286:mirbase
Length = 100
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aagtgactagaccgaacactcgtgctataattttaaaa 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttt 37
>36437_dme-mir-286:mirbase
Length = 100
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aagtgactagaccgaacactcgtgctataattttaaaa 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttt 37
>37167_dse-mir-286:mirbase
Length = 99
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aagtgactagaccgaacactcgtgctataattttaaaa 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttt 37
>37243_dsi-mir-286:mirbase
Length = 100
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aagtgactagaccgaacactcgtgctataattttaaaa 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttt 37
>37536_dya-mir-286:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtgactagaccgaacactcgtgctataattttaaaa 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttt 37
>37460_dwi-mir-286:mirbase
Length = 108
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 66 aaagtgactagaccgaacactcgtgctataattttaa 102
|||||||||||||||||||||||||||||||||||||
Sbjct: 72 aaagtgactagaccgaacactcgtgctataattttaa 108
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 3 aaaattaaatggcgattgtcggtatggtcgctttt 37
|||||| |||||||||||||||||| ||| |||||
Sbjct: 1 aaaattgaatggcgattgtcggtatagtctctttt 35
>36880_dpe-mir-286:mirbase
Length = 96
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 67 aagtgactagaccgaacactcgtgctataatttta 101
|||||||||||||||||||||||||||||||||||
Sbjct: 59 aagtgactagaccgaacactcgtgctataatttta 93
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
||||||||||||||||||||||||| |||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtttggtcgctttt 37
>36961_dps-mir-286:mirbase
Length = 97
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 67 aagtgactagaccgaacactcgtgctataatttta 101
|||||||||||||||||||||||||||||||||||
Sbjct: 59 aagtgactagaccgaacactcgtgctataatttta 93
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
||||||||||||||||||||||||| |||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtttggtcgctttt 37
>35216_aae-mir-286b-1:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 agtgactagaccgaacactcgt 89
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
>35217_aae-mir-286b-2:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 agtgactagaccgaacactcgt 89
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
>35215_aae-mir-286a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 agtgactagaccgaacactcg 88
|||||||||||||||||||||
Sbjct: 61 agtgactagaccgaacactcg 81
>35308_aga-mir-286:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 agtgactagaccgaacactcg 88
|||||||||||||||||||||
Sbjct: 59 agtgactagaccgaacactcg 79
