miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37383_dvi-mir-288:mirbase
Length = 97
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 2 gccgtgtcgtaattagctgtgcagaacgtagctggcgataattaatgacgttggtcacgt 61
|||| |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||
Sbjct: 3 gccgcgtcgtaattagctgtgcacaacgttgctggcgataattaatgactttggtcacgt 62
Query: 62 tggtttcatgtcgatttcatttcatgacacggccg 96
|||||||||||||||||||||||||||||||||||
Sbjct: 63 tggtttcatgtcgatttcatttcatgacacggccg 97
>36806_dmo-mir-288:mirbase
Length = 96
Score = 155 bits (78), Expect = 7e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 7 gtcgtaattagctgtgcagaacgtagctggcgataattaatgacgttggtcacgttggtt 66
|||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||
Sbjct: 7 gtcgtaattagctgtgcacagcgttgctggcgataattaatgacgttggtcacgttggtt 66
Query: 67 tcatgtcgatttcatttcatgacacggccg 96
||||||||||||||||||||||||||||||
Sbjct: 67 tcatgtcgatttcatttcatgacacggccg 96
>36963_dps-mir-288:mirbase
Length = 96
Score = 127 bits (64), Expect = 2e-30
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 1 ggccgtgtcgtaattagctgtgcagaacgtagctggcgataattaatgacgttggtcacg 60
|||| ||||||||||||| | | | | ||| || ||||||||||||||||||||||||||
Sbjct: 1 ggccatgtcgtaattagcagggtacagcgttgccggcgataattaatgacgttggtcacg 60
Query: 61 ttggtttcatgtcgatttcatttcatgacacggccg 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttggtttcatgtcgatttcatttcatgacacggccg 96
>37462_dwi-mir-288:mirbase
Length = 94
Score = 123 bits (62), Expect = 2e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 35 ggcgataattaatgacgttggtcacgttggtttcatgtcgatttcatttcatgacacggc 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 ggcgataattaatgacgttggtcacgttggtttcatgtcgatttcatttcatgacacggc 92
Query: 95 cg 96
||
Sbjct: 93 cg 94
>36131_dan-mir-288:mirbase
Length = 92
Score = 121 bits (61), Expect = 1e-28
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 35 ggcgataattaatgacgttggtcacgttggtttcatgtcgatttcatttcatgacacggc 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 ggcgataattaatgacgttggtcacgttggtttcatgtcgatttcatttcatgacacggc 91
Query: 95 c 95
|
Sbjct: 92 c 92
>36882_dpe-mir-288:mirbase
Length = 96
Score = 119 bits (60), Expect = 4e-28
Identities = 87/96 (90%)
Strand = Plus / Plus
Query: 1 ggccgtgtcgtaattagctgtgcagaacgtagctggcgataattaatgacgttggtcacg 60
|||| ||||||||||||| | | | | ||| || ||||| ||||||||||||||||||||
Sbjct: 1 ggccatgtcgtaattagcagggtacagcgttgccggcgaaaattaatgacgttggtcacg 60
Query: 61 ttggtttcatgtcgatttcatttcatgacacggccg 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttggtttcatgtcgatttcatttcatgacacggccg 96
>36439_dme-mir-288:mirbase
Length = 97
Score = 115 bits (58), Expect = 6e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 35 ggcgataattaatgacgttggtcacgttggtttcatgtcgatttcatttcatgacacggc 94
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 ggcgataattaatgacggtggtcacgttggtttcatgtcgatttcatttcatgacacggc 95
Query: 95 cg 96
||
Sbjct: 96 cg 97
>37169_dse-mir-288:mirbase
Length = 97
Score = 115 bits (58), Expect = 6e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 35 ggcgataattaatgacgttggtcacgttggtttcatgtcgatttcatttcatgacacggc 94
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 ggcgataattaatgacggtggtcacgttggtttcatgtcgatttcatttcatgacacggc 95
Query: 95 cg 96
||
Sbjct: 96 cg 97
>37245_dsi-mir-288:mirbase
Length = 97
Score = 115 bits (58), Expect = 6e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 35 ggcgataattaatgacgttggtcacgttggtttcatgtcgatttcatttcatgacacggc 94
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 ggcgataattaatgacggtggtcacgttggtttcatgtcgatttcatttcatgacacggc 95
Query: 95 cg 96
||
Sbjct: 96 cg 97
>37538_dya-mir-288:mirbase
Length = 96
Score = 115 bits (58), Expect = 6e-27
Identities = 82/90 (91%)
Strand = Plus / Plus
Query: 6 tgtcgtaattagctgtgcagaacgtagctggcgataattaatgacgttggtcacgttggt 65
||||||||||||| | ||| ||| || ||||||||||||||||| |||||||||||||
Sbjct: 7 tgtcgtaattagcggagcacggcgttgccggcgataattaatgacggtggtcacgttggt 66
Query: 66 ttcatgtcgatttcatttcatgacacggcc 95
||||||||||||||||||||||||||||||
Sbjct: 67 ttcatgtcgatttcatttcatgacacggcc 96
>36209_der-mir-288:mirbase
Length = 97
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 35 ggcgataattaatgacgttggtcacgttggtttcatgtcgatttcatttcatgacacggc 94
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 36 ggcgataattaatgacggtggtcacgttggtttcatgtcgatttcatttcaggacacggc 95
Query: 95 cg 96
||
Sbjct: 96 cg 97
