miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37388_dvi-mir-308:mirbase
Length = 62
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 34 gaaaatcaaatcacaggattatactgtgag 63
||||||||||||||||||||||||||||||
Sbjct: 33 gaaaatcaaatcacaggattatactgtgag 62
>36811_dmo-mir-308:mirbase
Length = 62
Score = 58.0 bits (29), Expect = 7e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 35 aaaatcaaatcacaggattatactgtgag 63
|||||||||||||||||||||||||||||
Sbjct: 34 aaaatcaaatcacaggattatactgtgag 62
>36215_der-mir-308:mirbase
Length = 63
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 36 aaatcaaatcacaggattatactgtgag 63
||||||||||||||||||||||||||||
Sbjct: 36 aaatcaaatcacaggattatactgtgag 63
>36137_dan-mir-308:mirbase
Length = 62
Score = 52.0 bits (26), Expect = 4e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 34 gaaaatcaaatcacaggattatactgtgag 63
|||| |||||||||||||||||||||||||
Sbjct: 33 gaaactcaaatcacaggattatactgtgag 62
>37175_dse-mir-308:mirbase
Length = 63
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 39 tcaaatcacaggattatactgtgag 63
|||||||||||||||||||||||||
Sbjct: 39 tcaaatcacaggattatactgtgag 63
>37251_dsi-mir-308:mirbase
Length = 63
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 39 tcaaatcacaggattatactgtgag 63
|||||||||||||||||||||||||
Sbjct: 39 tcaaatcacaggattatactgtgag 63
>37468_dwi-mir-308:mirbase
Length = 63
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 39 tcaaatcacaggattatactgtgag 63
|||||||||||||||||||||||||
Sbjct: 39 tcaaatcacaggattatactgtgag 63
>37544_dya-mir-308:mirbase
Length = 63
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 39 tcaaatcacaggattatactgtgag 63
|||||||||||||||||||||||||
Sbjct: 39 tcaaatcacaggattatactgtgag 63
>36453_dme-mir-308:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 40 caaatcacaggattatactgtgag 63
||||||||||||||||||||||||
Sbjct: 40 caaatcacaggattatactgtgag 63
>36454_dme-mir-308:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 40 caaatcacaggattatactgtgag 63
||||||||||||||||||||||||
Sbjct: 40 caaatcacaggattatactgtgag 63
>36887_dpe-mir-308:mirbase
Length = 62
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 40 caaatcacaggattatactgtgag 63
||||||||||||||||||||||||
Sbjct: 39 caaatcacaggattatactgtgag 62
>36970_dps-mir-308:mirbase
Length = 62
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 40 caaatcacaggattatactgtgag 63
||||||||||||||||||||||||
Sbjct: 39 caaatcacaggattatactgtgag 62
>35221_aae-mir-308:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tcaaatcacaggattatactgtgag 63
||||||||||||| |||||||||||
Sbjct: 49 tcaaatcacaggagtatactgtgag 73
>35312_aga-mir-308:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tcaaatcacaggattatactgtgag 63
||||||||||||| |||||||||||
Sbjct: 56 tcaaatcacaggagtatactgtgag 80
>36043_cqu-mir-308:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tcaaatcacaggattatactgtgag 63
||||||||||||| |||||||||||
Sbjct: 44 tcaaatcacaggagtatactgtgag 68
