miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36307_dgr-mir-309-2:mirbase
Length = 76
Score = 151 bits (76), Expect = 8e-38
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1 attatatggcaaaccttgttcagttttgacaactttgtttctgtgcatcatcactgggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attatatggcaaaccttgttcagttttgacaactttgtttctgtgcatcatcactgggtg 60
Query: 61 aagtttgtcgtataat 76
||||||||||||||||
Sbjct: 61 aagtttgtcgtataat 76
>36812_dmo-mir-309:mirbase
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 49 catcactgggtgaagtttgtcgtataat 76
||||||||||||||||||||||||||||
Sbjct: 48 catcactgggtgaagtttgtcgtataat 75
>37389_dvi-mir-309:mirbase
Length = 74
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 49 catcactgggtgaagtttgtcgtataat 76
||||||||||||||||||||||||||||
Sbjct: 47 catcactgggtgaagtttgtcgtataat 74
>37469_dwi-mir-309:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 49 catcactgggtgaagtttgtcgtataat 76
||||||||||||||||||||| ||||||
Sbjct: 28 catcactgggtgaagtttgtcttataat 1
>36888_dpe-mir-309:mirbase
Length = 68
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 cactgggtgaagtttgtcgtataat 76
|||||||||||||||||| ||||||
Sbjct: 44 cactgggtgaagtttgtcttataat 68
>36971_dps-mir-309:mirbase
Length = 68
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 52 cactgggtgaagtttgtcgtataat 76
|||||||||||||||||| ||||||
Sbjct: 44 cactgggtgaagtttgtcttataat 68
