miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37393_dvi-mir-315a:mirbase
Length = 82
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagcctttcacttgacacttggctttcgagtaataa 65
|||| |||||||||||||||||||||||| | || | | ||||||||||||||||||||
Sbjct: 6 atatcattttgattgttgctcagaaagccctgcattcaatacttggctttcgagtaataa 65
Query: 66 tcgaaaccaaataagcg 82
|||||||||||||||||
Sbjct: 66 tcgaaaccaaataagcg 82
>36815_dmo-mir-315:mirbase
Length = 83
Score = 81.8 bits (41), Expect = 7e-17
Identities = 71/80 (88%), Gaps = 7/80 (8%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagcc-----tttcacttgacacttggctttcgagt 60
||||||||||||||||||||||||||||| ||| |||| ||| ||||||||||||
Sbjct: 6 atataattttgattgttgctcagaaagcccgtaatttaacttaaca--tggctttcgagt 63
Query: 61 aataatcgaaaccaaataag 80
||||||||||||||||||||
Sbjct: 64 aataatcgaaaccaaataag 83
>37471_dwi-mir-315:mirbase
Length = 85
Score = 69.9 bits (35), Expect = 3e-13
Identities = 69/78 (88%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagcctt--tcacttga-cacttggctttcgagtaa 62
||||||||||||||||||||||||||||| | | |||| | || |||||||||||| ||
Sbjct: 6 atataattttgattgttgctcagaaagccctcattactttatcagttggctttcgagcaa 65
Query: 63 taatcgaaaccaaataag 80
|||| |||||||||||||
Sbjct: 66 taattgaaaccaaataag 83
>37182_dse-mir-315:mirbase
Length = 82
Score = 61.9 bits (31), Expect = 6e-11
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagcctttcacttgacacttggctttcgagtaataa 65
||||||||||||||||||||||||||||| || | || |||||||||||| |||||
Sbjct: 6 atataattttgattgttgctcagaaagcccttattgtaccagttggctttcgagcaataa 65
Query: 66 tcgaaaccaaataag 80
| ||||||| |||||
Sbjct: 66 ttgaaaccagataag 80
>37551_dya-mir-315-1:mirbase
Length = 84
Score = 60.0 bits (30), Expect = 3e-10
Identities = 66/77 (85%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagccttt--cacttgacacttggctttcgagtaat 63
||||||||||||||||||||||||||||| || | || ||| ||||||||||| |||
Sbjct: 6 atataattttgattgttgctcagaaagcccttactatttaacagctggctttcgagcaat 65
Query: 64 aatcgaaaccaaataag 80
||| ||||||| |||||
Sbjct: 66 aattgaaaccagataag 82
>37552_dya-mir-315-2:mirbase
Length = 84
Score = 60.0 bits (30), Expect = 3e-10
Identities = 66/77 (85%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagccttt--cacttgacacttggctttcgagtaat 63
||||||||||||||||||||||||||||| || | || ||| ||||||||||| |||
Sbjct: 6 atataattttgattgttgctcagaaagcccttactatttaacagctggctttcgagcaat 65
Query: 64 aatcgaaaccaaataag 80
||| ||||||| |||||
Sbjct: 66 aattgaaaccagataag 82
>36144_dan-mir-315:mirbase
Length = 84
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagcc 34
|||||||||||||||||||||||||||||
Sbjct: 6 atataattttgattgttgctcagaaagcc 34
>36226_der-mir-315:mirbase
Length = 83
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagcc 34
|||||||||||||||||||||||||||||
Sbjct: 6 atataattttgattgttgctcagaaagcc 34
>36467_dme-mir-315:mirbase
Length = 84
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagcc 34
|||||||||||||||||||||||||||||
Sbjct: 6 atataattttgattgttgctcagaaagcc 34
>36468_dme-mir-315:mirbase
Length = 84
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagcc 34
|||||||||||||||||||||||||||||
Sbjct: 6 atataattttgattgttgctcagaaagcc 34
>37258_dsi-mir-315:mirbase
Length = 84
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagcc 34
|||||||||||||||||||||||||||||
Sbjct: 6 atataattttgattgttgctcagaaagcc 34
>35085_api-mir-315:mirbase
Length = 65
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcctttca 39
||||||||||||||||||||||||||||
Sbjct: 1 ttttgattgttgctcagaaagcctttca 28
>38885_lgi-mir-315:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 aattttgattgttgctcagaaagcc 34
|||||||||||||||||||||||||
Sbjct: 19 aattttgattgttgctcagaaagcc 43
>34896_sko-mir-315:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcctt 36
|||||||||||||||||||||||||
Sbjct: 21 ttttgattgttgctcagaaagcctt 45
>35225_aae-mir-315:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 aattttgattgttgctcagaaagcc 34
|||||||||||||||||||||||||
Sbjct: 14 aattttgattgttgctcagaaagcc 38
>35314_aga-mir-315:mirbase
Length = 76
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 aattttgattgttgctcagaaagcc 34
|||||||||||||||||||||||||
Sbjct: 6 aattttgattgttgctcagaaagcc 30
>35392_ame-mir-315:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcctt 36
|||||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcctt 36
>36045_cqu-mir-315:mirbase
Length = 93
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 aattttgattgttgctcagaaagcc 34
|||||||||||||||||||||||||
Sbjct: 15 aattttgattgttgctcagaaagcc 39
>37623_nlo-mir-315:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcct 35
||||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcct 35
>37668_nvi-mir-315:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcct 35
||||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcct 35
>38775_cte-mir-315:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 21 ttttgattgttgctcagaaagcc 43
>35031_dpu-mir-315:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 21 ttttgattgttgctcagaaagcc 43
>36890_dpe-mir-315:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcc 34
>36974_dps-mir-315:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcc 34
>37798_tca-mir-315:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcc 34
>25540_pma-mir-315:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tttgattgttgctcagaaagcc 34
||||||||||||||||||||||
Sbjct: 11 tttgattgttgctcagaaagcc 32
>34986_isc-mir-315:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaa 30
|||||||||||||||||||
Sbjct: 21 ttttgattgttgctcagaa 39
