miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36333_dme-mir-4:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttttccggtcataaagctagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttttccggtcataaagctagac 60
Query: 61 aaccattgaagttcgttgtgg 81
|||||||||||||||||||||
Sbjct: 61 aaccattgaagttcgttgtgg 81
>37119_dse-mir-4:mirbase
Length = 81
Score = 145 bits (73), Expect = 5e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttttccggtcataaagctagac 60
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 1 ttgcaattagtttctttggtcgtccagccttaggtgacttttccgatcataaagctagac 60
Query: 61 aaccattgaagttcgttgtgg 81
|||||||||||||||||||||
Sbjct: 61 aaccattgaagttcgttgtgg 81
>37197_dsi-mir-4:mirbase
Length = 81
Score = 145 bits (73), Expect = 5e-36
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttttccggtcataaagctagac 60
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 1 ttgcaattagtttctttggtcgtccagccttaggtgacttttccgatcataaagctagac 60
Query: 61 aaccattgaagttcgttgtgg 81
|||||||||||||||||||||
Sbjct: 61 aaccattgaagttcgttgtgg 81
>36159_der-mir-4:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttttccggtcataaagctagac 60
||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||
Sbjct: 1 ttgcaattagtttctttggtcgtccagccttaggtgacttttctgatcataaagctagac 60
Query: 61 aaccattgaagttcgttgtgg 81
|||||||||||||||||||||
Sbjct: 61 aaccattgaagttcgttgtgg 81
>36242_dgr-mir-4-1:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttttccggtcataaagctagac 60
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttctctgatcataaagctagac 60
Query: 61 aaccattgaagttcgttgtgg 81
|||||||||||||||||||||
Sbjct: 61 aaccattgaagttcgttgtgg 81
>36243_dgr-mir-4-2:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttttccggtcataaagctagac 60
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttctctgatcataaagctagac 60
Query: 61 aaccattgaagttcgttgtgg 81
|||||||||||||||||||||
Sbjct: 61 aaccattgaagttcgttgtgg 81
>36757_dmo-mir-4:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttttccggtcataaagctagac 60
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttctctgatcataaagctagac 60
Query: 61 aaccattgaagttcgttgtgg 81
|||||||||||||||||||||
Sbjct: 61 aaccattgaagttcgttgtgg 81
>36830_dpe-mir-4:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttttccggtcataaagctagac 60
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttctctgatcataaagctagac 60
Query: 61 aaccattgaagttcgttgtgg 81
|||||||||||||||||||||
Sbjct: 61 aaccattgaagttcgttgtgg 81
>36906_dps-mir-4:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttttccggtcataaagctagac 60
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttctctgatcataaagctagac 60
Query: 61 aaccattgaagttcgttgtgg 81
|||||||||||||||||||||
Sbjct: 61 aaccattgaagttcgttgtgg 81
>37333_dvi-mir-4:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttttccggtcataaagctagac 60
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttctctgatcataaagctagac 60
Query: 61 aaccattgaagttcgttgtgg 81
|||||||||||||||||||||
Sbjct: 61 aaccattgaagttcgttgtgg 81
>37408_dwi-mir-4:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttttccggtcataaagctagac 60
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttctctgatcataaagctagac 60
Query: 61 aaccattgaagttcgttgtgg 81
|||||||||||||||||||||
Sbjct: 61 aaccattgaagttcgttgtgg 81
>37487_dya-mir-4:mirbase
Length = 81
Score = 137 bits (69), Expect = 1e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttttccggtcataaagctagac 60
||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||
Sbjct: 1 ttgcaattagtttctttggtcgtccagccttaggtgacttttctgatcataaagctagac 60
Query: 61 aaccattgaagttcgttgtgg 81
|||||||||||||||||||||
Sbjct: 61 aaccattgaagttcgttgtgg 81
>36081_dan-mir-4:mirbase
Length = 81
Score = 129 bits (65), Expect = 3e-31
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1 ttgcaattagtttctttggtcgtccagccttaggtgatttttccggtcataaagctagac 60
||||||||||||||||||||||||||||||||||||| || || | ||||||||||||||
Sbjct: 1 ttgcaattagtttctttggtcgtccagccttaggtgacttctctgatcataaagctagac 60
Query: 61 aaccattgaagttcgttgtgg 81
|||||||||||||||||||||
Sbjct: 61 aaccattgaagttcgttgtgg 81
>25693_xtr-mir-9b:mirbase
Length = 74
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 gtcataaagctagacaacc 64
|||||||||||||||||||
Sbjct: 42 gtcataaagctagacaacc 60
